Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq110 113 4e-20 >seq110 Length=92542 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 || |||||||| ||| | || || | || || || || || ||| || || | Sbjct 53131 AAGATGCAAATTTTCGTTAAGACCCTTACAGGTAAGACTATCACCTTGGAGGTCGAGTCT 53072 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || ||| | | | || | |||||||| || ||||| ||||| | || ||| Sbjct 53071 TCGGACACGATCGACAATGTCAAGCAAAAGATCCAGGATAAGGAAGGAATTCCACCTGAT 53012 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 ||||| ||| | |||||||| || ||||| |||||||| || |||| | | |||||| Sbjct 53011 CAACAGAGATTGATCTTTGCTGGTAAACAGTTGGAAGATGGCAGAACTCTTTCTGATTAC 52952 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 |||||||||||||||||||| |||||| |||| || |||| |||| || Sbjct 52951 AATATTCAGAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 52902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428335065558245