Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq110 118 9e-22 >seq110 Length=92542 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091 || |||||||| ||| | || || | || || || || || ||| || || | Sbjct 53131 AAGATGCAAATTTTCGTTAAGACCCTTACAGGTAAGACTATCACCTTGGAGGTCGAGTCT 53072 Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151 | || ||| | | | || |||||||||| || ||||| ||||| | || ||| Sbjct 53071 TCGGACACGATCGACAATGTCAAGCAAAAGATCCAGGATAAGGAAGGAATTCCACCTGAT 53012 Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211 ||||| ||| | |||||||| || ||||| ||||||||| || |||| | | |||||| Sbjct 53011 CAACAGAGATTGATCTTTGCTGGTAAACAGTTGGAAGATGGCAGAACTCTTTCTGATTAC 52952 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||| ||||||||||| |||||| |||| || |||| |||| || Sbjct 52951 AATATTCAGAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 52902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410795903821106