Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq110 102 1e-16
seq1 96.9 5e-15
>seq110
Length=92542
Score = 102 bits (112), Expect = 1e-16
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | ||||| || ||||| || ||||| || | ||| | || |
Sbjct 53128 ATGCAAATTTTCGTTAAGACCCTTACAGGTAAGACTATCACCTTGGAGGTCGAGTCTTCG 53069
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || || ||| | || || || || || ||||| ||||| || ||||||||||||
Sbjct 53068 GACACGATCGACAATGTCAAGCAAAAGATCCAGGATAAGGAAGGAATTCCACCTGATCAA 53009
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| || | || ||||| || ||||| || || ||| | |||| | ||||| |||
Sbjct 53008 CAGAGATTGATCTTTGCTGGTAAACAGTTGGAAGATGGCAGAACTCTTTCTGATTACAAT 52949
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTA 124767
||||| || ||||| || | || ||||| || | || |||||||||
Sbjct 52948 ATTCAGAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGTA 52900
>seq1
Length=504328
Score = 96.9 bits (106), Expect = 5e-15
Identities = 163/236 (69%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 124535 TACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGC 124594
|| ||||||||| || | ||||| | || || || || || || | || | || |
Sbjct 435304 TAGAATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACCATTACCTTGGAAGTCGAGTC 435245
Query 124595 AAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGA 124654
||| || ||| ||| | || ||||| ||||| ||||| || || || ||||||||
Sbjct 435244 TTCTGACACCATTGACAATGTCAAGCAGAAGATTCAGGATAAGGAGGGAATCCCACCTGA 435185
Query 124655 TCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTA 124714
|||||| || | ||||| || || || || || || || || |||| | |||||
Sbjct 435184 TCAACAGAGATTGATTTTCGCTGGTAAGCAGTTGGAAGACGGTAGAACTCTTTCTGATTA 435125
Query 124715 TAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTA 124770
|| || ||||| || || ||| | || |||||| | | || ||||||||||||
Sbjct 435124 CAACATCCAAAAGGAGTCCACTCTTCACTTGGTTCTTAGATTGAGAGGTGGTATTA 435069
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755454309667200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |