Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq96 84.2 2e-11 seq1 84.2 2e-11 >seq96 Length=143779 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 133224 TTGACCACTTGAAACTCGCCGGCGAGAACGCGTCTGAGATATACATTCGACGTGAACGGT 133283 || || |||||| |||||| | ||||| ||||| ||||||||| || || || ||| Sbjct 91379 TTCACAACTTGATGCTCGCCTGACAGAACCCGTCTAGTATATACATTGGAAGTTAAAGGT 91438 Query 133284 TCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATGTACGCCACC 133343 || ||| ||||| | | |||| |||||| | || | ||||||||||| | || || Sbjct 91439 TCAAAACATTCGGTATATCCGAATATCTGTGAAGTTGAAGCCGTGGGCATCAAAGCAACA 91498 Query 133344 AACAAAGAGTTTCTTACGCCGTACTT 133369 | | || |||||||| || ||||| Sbjct 91499 CAGAGCGAATTTCTTACACCATACTT 91524 >seq1 Length=504328 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | ||||| | |||||||| | || ||||| ||||| ||||||||||| Sbjct 435072 TACCACCTCTCAATCTAAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAATCAG 435131 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| | || || | ||| || |||||| | || | | ||| ||||| || | Sbjct 435132 AAAGAGTTCTACCGTCTTCCAACTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGTG 435191 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || |||||||| || ||| || || || || | || | |||||| | ||||| Sbjct 435192 GGATTCCCTCCTTATCCTGAATCTTCTGCTTGACATTGTCAATGGTGTCAGAAGACTCGA 435251 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | ||| | || || || |||| || || || ||||| ||||| Sbjct 435252 CTTCCAAGGTAATGGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCAT 435300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829453571868