Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq96 84.2 2e-11
seq1 84.2 2e-11
>seq96
Length=143779
Score = 84.2 bits (92), Expect = 2e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 133224 TTGACCACTTGAAACTCGCCGGCGAGAACGCGTCTGAGATATACATTCGACGTGAACGGT 133283
|| || |||||| |||||| | ||||| ||||| ||||||||| || || || |||
Sbjct 91379 TTCACAACTTGATGCTCGCCTGACAGAACCCGTCTAGTATATACATTGGAAGTTAAAGGT 91438
Query 133284 TCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATGTACGCCACC 133343
|| ||| ||||| | | |||| |||||| | || | ||||||||||| | || ||
Sbjct 91439 TCAAAACATTCGGTATATCCGAATATCTGTGAAGTTGAAGCCGTGGGCATCAAAGCAACA 91498
Query 133344 AACAAAGAGTTTCTTACGCCGTACTT 133369
| | || |||||||| || |||||
Sbjct 91499 CAGAGCGAATTTCTTACACCATACTT 91524
>seq1
Length=504328
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | ||||| | |||||||| | || ||||| ||||| |||||||||||
Sbjct 435072 TACCACCTCTCAATCTAAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAATCAG 435131
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| ||| | || || | ||| || |||||| | || | | ||| ||||| || |
Sbjct 435132 AAAGAGTTCTACCGTCTTCCAACTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGTG 435191
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || |||||||| || ||| || || || || | || | |||||| | |||||
Sbjct 435192 GGATTCCCTCCTTATCCTGAATCTTCTGCTTGACATTGTCAATGGTGTCAGAAGACTCGA 435251
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || | ||| | || || || |||| || || || ||||| |||||
Sbjct 435252 CTTCCAAGGTAATGGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCAT 435300
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433829453571868
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |