Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq137 114 1e-20 >seq137 Length=354847 Score = 114 bits (126), Expect = 1e-20 Identities = 269/404 (67%), Gaps = 24/404 (6%) Strand=Plus/Minus Query 20221 GATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATG----TTGA 20276 ||||||||||| | || ||||| |||||||| |||||||| |||||||||| ||| Sbjct 274540 GATTTGGGTCCAATATACGGATTCCAATGGAGGCATTTTGGTGCTGAATATGAAAATTGC 274481 Query 20277 CATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAAT 20336 ||| ||| ||||| || |||| | ||||| || || |||||| || || Sbjct 274480 CAT----ACAGATTATACAGGTAAAGGGTTTGATCAGATAGCCAACGTTATTCATACCAT 274425 Query 20337 TAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCC 20396 ||| ||| |||| | |||| |||| || | | || ||||| | || | | Sbjct 274424 TAAGACGGACCCTTATAACAGGCGAATCCTTCTTTCTGCATGGAATCCACCAGCTTTTAA 274365 Query 20397 TTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGA--- 20453 ||||| | || ||||||||| || | || || || || ||| | | || || Sbjct 274364 GAAGATGGCACTACCACCATGTCATGTGTTCTGTCAGTTCTATGTTAGTTACAA-GACCG 274306 Query 20454 ----------ATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTC 20503 |||| |||||||||||||| |||| || |||||| ||||||||| Sbjct 274305 GCAAACCCAGATTGAACTGTCAAATGTATCAGAGATCATGCGACATGGGATTGGGTGTTC 274246 Query 20504 CTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACAT-GTTACAGATTTA 20562 ||||||| |||||| || || || || || ||||||||||| ||| ||| ||| | Sbjct 274245 CTTTCAACATTGCATCATACGCTCTACTCACTTATATGATTGC-CATGGTTTGTGATATG 274187 Query 20563 AAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTA 20606 || | ||||| || |||| || || ||| | ||||| || Sbjct 274186 GAACCAGGTGAGTTCATCCATGTTATGGGTGACTCTCATATCTA 274143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399183129155155