Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq137 111 3e-19
>seq137
Length=354847
Score = 111 bits (122), Expect = 3e-19
Identities = 350/533 (66%), Gaps = 22/533 (4%)
Strand=Plus/Minus
Query 35330 CACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGA 35389
||||| ||||| | || || || | || | |||||| | || || |||| ||
Sbjct 274609 CACATATGGAAAGGCAACGGTTCAAGAGAGTATTTGGATTCAATTGGATTGACCGATCGA 274550
Query 35390 GCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATAT 35449
| || | |||||||| || ||||||||||||||||| | ||||||||||||||||||
Sbjct 274549 GAAGTTGATGATTTGGGTCCAATATACGGATTCCAATGGAGGCATTTTGGTGCTGAATAT 274490
Query 35450 GATACCTGTTCTTCCGATTATACTGG-AAAGGGTATTGATCAATTGGCCAATATACTAAA 35508
|| | || | | |||||||| || ||||||| ||||||| | ||||| | | |
Sbjct 274489 GAAAATTGCCATACAGATTATACAGGTAAAGGGT-TTGATCAGATAGCCAACGTTATTCA 274431
Query 35509 GACCCTGAGAGA-AAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGG 35567
||| | | ||| | || || | || | || || | | ||||||||||| |
Sbjct 274430 TACCATTA-AGACGGACCCTTATAACAGGCGAATCCTTCTTTCTGCATGGAATCCACCAG 274372
Query 35568 ATCTTCACCTTATGGCTCTTCCTCCATGCCACATG-ACTGCTCAATTTTATGT------- 35619
| || | ||||| || || ||||| || || ||| ||| || |||||
Sbjct 274371 CTTTTAAGAAGATGGCACTACCACCATGTCATGTGTTCTG-TCAGTTCTATGTTAGTTAC 274313
Query 35620 ------GGCTAATGGAGAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTT 35673
||| || || |||| || || |||||||| || | || | || ||
Sbjct 274312 AAGACCGGCAAACCCAG-ATTGAACTGTCAAATGTATCAGAGATCATGCGACATGGGATT 274254
Query 35674 GGGCGTGCCCTTCAATATTGCATCATACTCTCTTCTGACTCATCTGATGGCCA-GTATGG 35732
||| || || ||||| |||||||||||| |||| || ||| || |||| |||| | | |
Sbjct 274253 GGGTGTTCCTTTCAACATTGCATCATACGCTCTACTCACTTATATGATTGCCATGGTTTG 274194
Query 35733 TGGGTCTAAAACCGGGAGAGTTTATCCTCACTCTTGGTGACGCACACATTTATAATACCC 35792
| | | | |||| || ||||| |||| | | |||||| | || || ||||| |
Sbjct 274193 T-GATATGGAACCAGGTGAGTTCATCCATGTTATGGGTGACTCTCATATCTATAAAGATC 274135
Query 35793 ACATTGAGGTGTTAAAGAAGCAGTTGTGCCGCGTCCCTAGACCATTCCCTAAG 35845
| || ||| || |||||||| | | | ||| | ||||||||||||
Sbjct 274134 ATGTTAAGGCTTTGGAGAAGCAGATTGAAAGAGAGCCTCGTCCATTCCCTAAG 274082
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989581730450945
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |