Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq115 187 2e-42
seq96 154 1e-32
>seq115
Length=359903
Score = 187 bits (206), Expect = 2e-42
Identities = 1094/1728 (63%), Gaps = 71/1728 (4%)
Strand=Plus/Minus
Query 36949 GCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTA 37008
|||||||||||||| ||||| || | | | |||| || || ||||||||||| || |
Sbjct 6685 GCACCTCTGTCGGCAGCCATATCAATGACAGATTTCTGTGAGATCTCCCAAACGGTACGA 6626
Query 37009 TATATTTGTTTTATATTATCTGGTAAATCT---AAATGTTGAATAGAACCATTATGTAAC 37065
|| | || || | || ||||| | || | || | || ||||||||||||| |
Sbjct 6625 TACAATTTCTTGAATTTCTCTGGCACATTTGGTAAGTTCTGGATAGAACCATTATC---C 6569
Query 37066 ACAATTGTA---TTCTTTATGTCATTATTCCACATATTTCTACTTATTAGTTCTCTCAAT 37122
||| || | ||| || ||||| |||| ||| || || | || ||||
Sbjct 6568 TTAATGATAAAGTCCTTCATTGCATTACTCCAGATACCCATATCGATGAAGTCCTTCAAC 6509
Query 37123 AGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTA 37182
| | ||||| |||| ||| || || || | || ||||||||| ||| || |||
Sbjct 6508 ATATAAGGATTAACAATCTGGAACTCACCGGCCAAAACTCTTCTTTGATAGATGTTGGAT 6449
Query 37183 GTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATT 37242
|| |||| || | | || || | || | || ||||||||||||||||| ||||||
Sbjct 6448 GTGAATGGCTCGAAACATTCGTTGTAACCCATAATCTGAGATGTAGATGCAGTTGGCATT 6389
Query 37243 GGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATT----AATTCTCTTTTTTAGTTC 37298
||||| | || | ||| |||||||| | | || | || ||| || ||
Sbjct 6388 GGTGCCAATAACAACGAATTCCTCAATCC---TTTCTTGGCGACTTGAGCCTTTAAG-TC 6333
Query 37299 ATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGTAGAATACCTTT 37358
|| ||| ||||| | ||| ||||| ||||| ||||||||||||||| || ||||||||
Sbjct 6332 ATCCCAGTCCCAAAGATCGGTTGGTTTCTTATTCCACATATCATATTGAAGGATACCTTT 6273
Query 37359 ACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACT 37418
| ||||| || | | ||||| ||| | || | |||||||| ||
Sbjct 6272 AGATGCTGGCGATCCTTCGTATGTTGAATAGGTACCTTCCTCGGCAGCTAGTT---GACA 6216
Query 37419 AGATTCT---AGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGC 37475
||||||| | ||| |||| |||| || || || || || ||||| ||| ||
Sbjct 6215 AGATTCTTCCAATGCAGCATGGTATAAAGTCTCAAAGATCTGAATATTCAATTCACGAGC 6156
Query 37476 TTCTTCGCTATCGAATGCATAGCCCAATAAT-ATAAACACATCAGCCAAACCCTGAACAC 37534
|||| || ||||| | ||| | || || | || ||| || | ||| || | ||
Sbjct 6155 TTCTGGACTCTCGAACG-GTAGACGAAGCATGAAGAAAGTATCTGCAAGACCTTGGATAC 6097
Query 37535 CGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAAT 37594
||||| | || ||||||| | || |||| || || | ||| |||||||| || |
Sbjct 6096 CGATAGCAATAGGTCTATTTCTCATATTCGAATTACGGGCCTCTGGAACTGGATAGTAGT 6037
Query 37595 TGATATCTATTATTTTATTTAGATT---TTTAAC-----TAGT-ATTT-TCGTAATTATT 37644
| | ||||| | | | || | || |||| |||| |||| ||||| ||
Sbjct 6036 TCCTGTCTATAACTCTGTTCAAGTTACGAGTAACAACCTTAGTGATTTGATGTAAT--TT 5979
Query 37645 CTCAACTTGTCGAACATAAATACGTTATTATTAACAAATTTACTCAACGAA--------- 37695
||||| || |||| || ||| | || | | | | | ||||||||
Sbjct 5978 CTCAA--AGTTGAAC--CAAGACGAT-TTCTCATC----TGATTCAACGAATGCTGGAAG 5928
Query 37696 ATAGATCCTAG----ATTACATACAGCAACTTCATCTTCGTTACTA-AATTGTATAATCT 37750
| |||| ||| |||||| ||| ||||||| | || || | | ||| | || ||
Sbjct 5927 ACAGATATTAGCCAAATTACAGACACCAACTTC-TTTTGGTGAGGAGTATTCAACAACCT 5869
Query 37751 CTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTAC 37810
| || | || || |||| || || | ||| ||||||| ||| | ||||
Sbjct 5868 CACAGCATAAGTTGGATGACTTAATAGTACCGAGATTCTTTTGATTACTCTTTCTGTTAC 5809
Query 37811 AAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATT 37870
||| |||||| || | || | || || || ||| |||| ||||| | ||| |
Sbjct 5808 AAGCATCTTTGTAGATCATGAATGGAGTACCAGTTTCAGTTTGGGCCTCCAAAATCTGAT 5749
Query 37871 TCCATAAACTTCT-TGCTTTAAC-GATC-GCTTTAAtttttttCTTTGTTTCGTATTCTA 37927
||| || ||| | ||| || || | || || | ||| | |||| ||||
Sbjct 5748 ACCA-AAGCTTTTGTGCCTTGACAGTTCTTCTACCACGACCTTCCT--TTTCATATTTGG 5692
Query 37928 TATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGAC 37987
| || ||||| | || |||| || | |||||| | | || ||| ||| | ||
Sbjct 5691 TGTACAATTTTTCGAACTCATCACCGTAGACATCGGAAAGGCCAGGAGCTTCAGAAGGTG 5632
Query 37988 ACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATA 38047
| | | || |||| ||| || ||| || || | ||| || | |||||| | ||| |
Sbjct 5631 AGAACAAAGTCCATGGACCATTTTCTTCCACACGCTTCATGAAAAGATCAGGAATCCAAA 5572
Query 38048 ATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTA 38107
|| | || ||||| || |||| ||||| || || ||| | | | |
Sbjct 5571 GAGCTGGGAACAAATCACGGGCTCTAATCTCTTCCTTACCATGGTTCATCCGGATATCGA 5512
Query 38108 GAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTT 38167
|||||||| ||||| || ||||| ||||| | ||| | | || || || || | |
Sbjct 5511 TGAAATCGAAGATATCTGCATGCCAAGGTTCCAAATAGACGGCAATGGCACCAGGACGCT 5452
Query 38168 TATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTA 38227
| | ||| || |||| | |||||| | || | || | | | | |||||| | |
Sbjct 5451 TGTTACCACCTTGATCGACATATCTGGCAGTACTGTTGAAGACACGAATCATAGGAATGA 5392
Query 38228 TACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTA 38287
|||||||||| | || || |||| | || || | || |||| || || ||| |
Sbjct 5391 TACCATTAGAAGTACCATTGGTACCTGCAATGTATGAGCCAGTAGCACGAATGTTATGGA 5332
Query 38288 TCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAA 38347
| || || || ||||| || ||| || ||||||||||| || || || |||||
Sbjct 5331 TATGCATACCGATACCACCGGCGGTTTTAGAAATTAAAGCGCACTGCTTCAAAGTATCGT 5272
Query 38348 ATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCA 38407
| |||||||| || |||||| || || | | | ||||| |||||| |||||
Sbjct 5271 AGATACCTTCGATGGAGTCATCTTTCATGGCAACCAAGAAACATGAAGACATCTGAGGTC 5212
Query 38408 ATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAAT 38467
||||| || || || || || || || || ||||| |||| | || ||||
Sbjct 5211 TAGGAGTACCTGCATTGAACAAGGTTGGTGAAGCATGCGTGAAGTAACGTTTAGACATGA 5152
Query 38468 AATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCA 38527
|| || | || | || | | ||||||| || || ||||| | | || | ||
Sbjct 5151 GGTTGTAAGACTCAAGAACTTTAGGAATATCACTACCATGGATACCAACGGCAACACGCA 5092
Query 38528 TTAGCATATGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTT 38587
| || | ||| || ||||| || | |||| || | |||| | ||| || ||
Sbjct 5091 TCAGTAAATGCTGAGGTCTCTCGGCGACTTTACCGTTGATTCTAAGCAAATATGACCGTT 5032
Query 38588 CTAATGTTTTTATTCCAAAATAACTATA--TGAATAATCTCTATCGTA 38633
| || ||||| | || |||||| | || ||| |||||||||||||
Sbjct 5031 CCAACGTTTTGAAACCGAAATAATTGTAGTTGA--AATCTCTATCGTA 4986
>seq96
Length=143779
Score = 154 bits (170), Expect = 1e-32
Identities = 600/922 (65%), Gaps = 22/922 (2%)
Strand=Plus/Plus
Query 37699 GATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTACAG 37758
|| |||| |||||| || |||||||| || | | | ||| | || ||| |||
Sbjct 91970 GAACCTAAATTACAAACGGCAACTTCGTCCTTGGAAGAGTATTCAACAACCTCACAACAA 92029
Query 37759 AGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCT 37818
||||| ||| | || ||||| | ||| ||| || ||||| |||||| | ||||
Sbjct 92030 AGATTGGATGATTTGATGGTTCCAAGATTCTGTTGGTTTGATTTGGCATTACAGGCATCT 92089
Query 37819 TTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAA 37878
||||| || | | || || || |||| |||| | ||| | ||| |
Sbjct 92090 TTATAGAGAAGGAAAGGTGTACCAGTTTCTGCCTGAGATATAAGAATCTTCTCCCAGACC 92149
Query 37879 CTTCTTGCTTTAACGATC-GCTTTA-AtttttttCTT-TGTTTCGTATTCTATATATAAT 37935
||||||| || |||| ||||| || | | | || ||| || || | ||||||||
Sbjct 92150 TTTCTTGCCTT---GATCTGCTTTGTATATCTCTTTTCTGTCTCATACGTTGTATATAAT 92206
Query 37936 TTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGA-CATTCGCATGGACACATTAG 37994
| ||||| | | ||||| ||||| | | ||||||| || | | | | | | |||
Sbjct 92207 GTATTAAACTTGTCACCCCAAACATCAGAAAGTCCTGGAGCAGTATCCTC-AGAAAATAG 92265
Query 37995 AGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGT 38054
| ||| ||||| ||| || | || ||||||||| || || | |||||| |||
Sbjct 92266 ACTCCACATGTCATCACTTTTAACTCTTTTCATAAATAAGTCTGGAATCCATAACGCATA 92325
Query 38055 AAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTA-AGCTTAGAAAAT 38113
||||| || ||| | |||||| || || ||||||||| | | | |||| |
Sbjct 92326 AAATAGATGCCTGGCCCGCATTTCTTCCTTGCCATGATTCTTTCTAAGATCCAAGAAT-T 92384
Query 38114 CGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCAC 38173
| | || ||| | |||||||||||||| ||| | ||||| ||||| ||||||| |
Sbjct 92385 CCATTACATCTGAGTGCCATGGTTCTAAATATGCACAGATTGCCCCTGGCCTTTTATTTC 92444
Query 38174 CTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCAT 38233
| || |||| || |||| | | ||| | | | |||| ||| || || || |||
Sbjct 92445 CCCCTTGATCAACATATTGAGATACACTATCAAAAACCCTTAGCATTGGAACAATTCCAC 92504
Query 38234 TAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACA 38293
||||| |||| ||| |||| || ||||| || ||| |||| | |||||| || ||
Sbjct 92505 TAGATGTGCCATTTGTACCTGAAATATAGGTTCCCGATGCTCTCACATTACTAATGTGCA 92564
Query 38294 ATCCTATTCCACCTGCATG-TTTTGATATTAAAGCGCATTGTTTTAAC-GTATCAAATAT 38351
|| || ||||| | ||| || || || | ||| |||| | | ||| || | |||||
Sbjct 92565 TCCCAATACCACCAG-ATGCCTTGGAAATCATAGCACATT-TGTGAACGGTCTTGAATAT 92622
Query 38352 ACCTTCTATACTGTCATCCTTT--ATTGGTAGTATAAAACAACTAGACATTTGAGGCAAT 38409
|| || | ||| |||| | || | || || || || | || || |||
Sbjct 92623 TCCGTCCAACGAATCA--CTTTCAAGTGCCACTAAGAAGCACGATGATAAATGCGGGAAT 92680
Query 38410 GGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAA 38469
||||| || ||||| ||||| || |||||||| | ||| || ||| || | || |
Sbjct 92681 TCCGTTCCAGCATTAAACAATGTCGGTGATGCATG-AAGAA-GATACTTCTGAGACATTA 92738
Query 38470 --TTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCA 38527
| || | | ||| || |||| | | | | | |||| | ||||| || ||||
Sbjct 92739 GGTGGTAACTCTGTATAGCAGCATCCAAGTTATCCTCATGAAGAGATAGAGCCACTCTCA 92798
Query 38528 TTAGCATATGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTT 38587
||| | || ||||||| |||| |||| |||| ||||| ||||| ||| | |
Sbjct 92799 TTAATAGATATTGTGGTGTTTCATGCGGTTTACCATTCACCTTAAGAAGATATGATCTCT 92858
Query 38588 CTAATGTTTTTATTCCAAAATA 38609
||| |||| | | |||||||||
Sbjct 92859 CTAGTGTTCTAAATCCAAAATA 92880
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468523751675760
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