Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq110 95.1 1e-14
>seq110
Length=92542
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| || | ||| || ||||||| ||||| || || ||||| || |||||
Sbjct 52902 CCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTCTGAATATTGTAATCAGAA 52961
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || || ||||| | ||||||||||||| |||||| | || ||||| || ||
Sbjct 52962 AGAGTTCTGCCATCTTCCAACTGTTTACCAGCAAAGATCAATCTCTGTTGATCAGGTGGA 53021
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| ||||| || || ||| ||||| || | | || | ||||| | | ||| |||
Sbjct 53022 ATTCCTTCCTTATCCTGGATCTTTTGCTTGACATTGTCGATCGTGTCCGAAGACTCGACC 53081
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| | ||| | ||||| || || | || || ||||| ||||||||
Sbjct 53082 TCCAAGGTGATAGTCTTACCTGTAAGGGTCTTAACGAAAATTTGCAT 53128
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496062890056800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |