Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq110 95.1 1e-14 >seq110 Length=92542 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | ||| || ||||||| ||||| || || ||||| || ||||| Sbjct 52902 CCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTCTGAATATTGTAATCAGAA 52961 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || ||||| | ||||||||||||| |||||| | || ||||| || || Sbjct 52962 AGAGTTCTGCCATCTTCCAACTGTTTACCAGCAAAGATCAATCTCTGTTGATCAGGTGGA 53021 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || ||||| || || ||| ||||| || | | || | ||||| | | ||| ||| Sbjct 53022 ATTCCTTCCTTATCCTGGATCTTTTGCTTGACATTGTCGATCGTGTCCGAAGACTCGACC 53081 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | ||||| || || | || || ||||| |||||||| Sbjct 53082 TCCAAGGTGATAGTCTTACCTGTAAGGGTCTTAACGAAAATTTGCAT 53128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496062890056800