Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq173 105 6e-18
>seq173
Length=13397
Score = 105 bits (116), Expect = 6e-18
Identities = 277/420 (66%), Gaps = 2/420 (0%)
Strand=Plus/Minus
Query 13384 ACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCGAAT 13443
|| || || || || ||||| || || ||| ||| || || || ||||| ||||| |||
Sbjct 11460 ACCCTCTTCTCGAAGAAGTTCGTCTTTCCTGCCAACGAAATGTTCTCCATGAAATCAAAT 11401
Query 13444 GGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAATAATCTATCAGCAATA 13503
||||| | | | | || || ||||| || || | | ||||| || |||
Sbjct 11400 GGATTCTTGGCGTTGTAGACCTTCTCACATCCGAGAGAGACCAGCAATCTGTCGGCACAG 11341
Query 13504 AACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATA 13563
|| |||| |||| | |||| | ||| || |||||||| | | ||||| | |
Sbjct 11340 AAGTCAACGTATTCACACATCATATCGCAGTTCATACCCAACAACGAAACAGGTAATGCG 11281
Query 13564 TTAGTTAA-AAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCTTAATAATGTC 13622
| | | ||| |||| | | ||| || ||||| | || || |||| || |||
Sbjct 11280 TCTCTCCAGAAACTCTTCT-CGATATCGACGGCCTCCGTCATGATTCTCTTGATGATGGT 11222
Query 13623 ATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCC 13682
||| |||||||| || | ||| || | | || || || || || || ||
Sbjct 11221 CTTACTAGGAGGATGCTTCAAGTGTGAGAATAGGAGGCAGGCGAAGTCCGTGTGTAGACC 11162
Query 13683 CTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttt 13742
|||||| || | ||||| ||||| || ||||| | ||||||||||| |||| || ||
Sbjct 11161 CTCATCCCTGCAGATAAGCTCGTTCGAGAATGTAAGACCTGGCATCAAACCTCTCTTCTT 11102
Query 13743 tAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGC 13802
||||| || || | ||| || |||||||| ||||| | ||||| | || ||||| ||
Sbjct 11101 CAACCAGAAGATCGAAGCAAACGATCCGGAGAAGAACACACCCTCGATGGCTGCAAAGGC 11042
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478587729157560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |