Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq1 95.1 9e-15
seq110 91.5 1e-13
>seq1
Length=504328
Score = 95.1 bits (104), Expect = 9e-15
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| | ||||| || | |||| ||||||||| | |||||||| ||
Sbjct 435074 CCACCTCTCAATCTAAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAATCAGAA 435133
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| || | |||| ||||| || || || || |||||||||| ||||||||| | ||
Sbjct 435134 AGAGTTCTACCGTCTTCCAACTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGTGGG 435193
Query 43003 ACACCTTCTTTTTCGCTGA-TCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061
| || || || || |||| || || ||||| || ||| ||||| || ||||||
Sbjct 435194 ATTCCCTCCTTATC-CTGAATCTTCTGCTTGACATTGTCAATGGTGTCAGAAGACTCGAC 435252
Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110
|| | || || || || || || | || || || ||||||||||||
Sbjct 435253 TTCCAAGGTAATGGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATT 435301
>seq110
Length=92542
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| || ||||| || | || ||||| || | ||||||||| ||
Sbjct 52902 CCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTCTGAATATTGTAATCAGAA 52961
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| || | | || ||||| ||||| || ||||| ||||||| ||||||||| | ||
Sbjct 52962 AGAGTTCTGCCATCTTCCAACTGTTTACCAGCAAAGATCAATCTCTGTTGATCAGGTGGA 53021
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| ||||| || || |||| | ||||| || | | ||||| || ||||||
Sbjct 53022 ATTCCTTCCTTATCCTGGATCTTTTGCTTGACATTGTCGATCGTGTCCGAAGACTCGACC 53081
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112
|| | || ||||| || || || || || || || ||||||||||| ||
Sbjct 53082 TCCAAGGTGATAGTCTTACCTGTAAGGGTCTTAACGAAAATTTGCATCTT 53131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381368768018382
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |