Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq102 84.2 3e-11 >seq102 Length=123167 Score = 84.2 bits (92), Expect = 3e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 19328 GTTAAAATTAAATTAAGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTT 19387 |||||| | | | | ||| || |||| || || | || ||||||||||| || ||| | Sbjct 105295 GTTAAAGTGAGAATGAGAACTACTAAGATCCCACAGATTGGTGATAAGTTCGCATCTCGT 105354 Query 19388 ACTGCTCAAAAAGGCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAA 19447 || ||| || || || |||||||| || | || ||||||||||| || || Sbjct 105355 CATGGTCAGAAGGGTACCATTGGTATGACCTACAGGCATGAAGATATGCCATTCACAGCT 105414 Query 19448 GATGGTATAGTGCCGGATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503 || ||||| || || ||| | || |||||||| ||| | ||||| ||| ||||| Sbjct 105415 GAAGGTATTGTTCCTGATATCATCATTAACCCTCATTGTATTCCATCTCGTATGAC 105470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595870666736400