Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq110 116 3e-21 >seq110 Length=92542 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| ||| |||||||| | ||||||||||| || | || ||||| Sbjct 52902 CCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTCTGAATATTGTAATCAGAA 52961 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| || ||| |||| |||||| || ||||||| ||||| || ||||| || ||| Sbjct 52962 AGAGTTCTGCCATCTTCCAACTGTTTACCAGCAAAGATCAATCTCTGTTGATCAGGTGGA 53021 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || ||||| || || | || ||| |||||| | ||| ||||| | ||||| Sbjct 53022 ATTCCTTCCTTATCCTGGATCTTTTGCTTGACATTGTCGATCGTGTCCGAAGACTCGACC 53081 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | ||||| || || || ||||| || || || || || ||||| Sbjct 53082 TCCAAGGTGATAGTCTTACCTGTAAGGGTCTTAACGAAAATTTGCAT 53128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290196948440