Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq92 145 1e-30
seq12 118 2e-22
>seq92
Length=180708
Score = 145 bits (160), Expect = 1e-30
Identities = 199/273 (73%), Gaps = 4/273 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
|||||||||||| | |||| |||| |||||||||| ||||| ||||||||||| || |
Sbjct 171725 CGCTAAGCGTCACAGAAAGAT-TCTTAGAGATAACATTCAAGGTATCACCAAGCCTGCAA 171783
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|| | | |||| | | ||||| |||||| | |||||| ||| ||||||||||
Sbjct 171784 TCAGAAGATTGGCAAGAAGAGGTGGTGTCAAGAGAATCTCTGCTTTGATCTATGAAGAAG 171843
Query 16551 TTCGTGATGTTTTGAAGATC-TTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACC 16609
|| | | ||| ||||| ||| ||| | ||| || ||| |||||| | |||||
Sbjct 171844 TTAGAGCTGTCTTGAA-ATCATTCTTAGAGAATGTCATCAGAGATGCTGTTACTTATACT 171902
Query 16610 GAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAA 16669
||||||||||| || |||||||| || || ||||| | ||||| || ||||| | ||
Sbjct 171903 GAGCACGCTAAGCGGAAGACTGTTACATCATTGGATGTTGTCTACGCTTTGAAGAGACAG 171962
Query 16670 GGCCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702
||| | | | |||||||| || ||||| ||
Sbjct 171963 GGCAGAACTTTGTATGGTTTCGGTGGTTAAGCT 171995
>seq12
Length=247580
Score = 118 bits (130), Expect = 2e-22
Identities = 189/269 (70%), Gaps = 2/269 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
|||||||||||| | | ||| |||| |||||||||| ||||| ||||||||||| || |
Sbjct 184010 CGCTAAGCGTCACAGAAAGAT-TCTTAGAGATAACATTCAAGGTATCACCAAGCCTGCAA 184068
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|| | | |||| | | ||||| |||||| | |||||| | | || || ||
Sbjct 184069 TCAGAAGATTGGCAAGAAGAGGTGGTGTCAAGAGAATCTCTGCTCTTATATACGAGGAAG 184128
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
| | | ||| |||||| ||| | ||| || ||| || ||| | |||||||
Sbjct 184129 TGAGAGCTGTCTTGAAGTCATTCTTGGAGAATGTCATCAGGGACGCTGTTACTTATACCG 184188
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || |||||||| || || ||||| |||| || || |||||| | ||||
Sbjct 184189 AGCACGCCAAGCGGAAGACTGTTACATCTTTGGATGTCGTTTACGCTTTGAAAAGACAAG 184248
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|| | | | || ||||| || |||||
Sbjct 184249 GCAGAACCTTGTACGGTTTCGGTGGTTAA 184277
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075036339047
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |