Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq115 149 2e-30 >seq115 Length=359903 Score = 149 bits (164), Expect = 2e-30 Identities = 532/821 (65%), Gaps = 22/821 (3%) Strand=Plus/Plus Query 363454 CCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCG 363513 || |||||| | | ||||||||||| ||||||||||| | ||| || | | Sbjct 5076 CCTCAGCATTTACTGATGCGTGTTGCCGTTGGTATCCATGGTAGTGATATTCCTAAAGTT 5135 Query 363514 ATTGAAACATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACAAT 363569 |||| | || || || ||||| ||| |||||||| || | ||||| | Sbjct 5136 CTTGAGTCTTACAACCTCATGTCTAAA----CGTTACTTCACGCATGCTTCACCAACCTT 5191 Query 363570 GTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTT-CTAAAAATGAAGG 363628 || |||||| || |||| || || ||||||||||| || |||||| | ||||| | Sbjct 5192 GTTCAATGCAGGTACTCCTAGACCTCAGATGTCTTCATG-TTTCTTGGTTGCCATGAAAG 5250 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 | || |||||||| ||||||| || || | ||| | || ||| | ||||| || | | Sbjct 5251 ATGACTCCATCGAAGGTATCTACGATACTTTGAAGCAGTGCGCTTTAATTTCTAAAACCG 5310 Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGC 363747 | || || || ||| | ||||| || ||||||| || | | |||||| || Sbjct 5311 CCGGTGGTATCGGTATGCATATCCATAACATTCGTGCTACTG-GCTCATACATTGCAGGT 5369 Query 363748 ACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 || || ||| || ||||| | |||| ||| ||||||| || ||| |||||| || Sbjct 5370 ACCAATGG-TACTTCTAATGGTATCATTCCTATGATTCGTGTCTTCAACAGTACTGCCAG 5428 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 || ||||| || ||||| ||||| || || |||| | ||| | || ||| Sbjct 5429 ATATGTCGATCAAGGTGGTAACAAGCGTCCTGGTGCCATTGCCGTCTATTTGGAACCTTG 5488 Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926 ||||| ||||| || || || | || |||||| ||| || || || || | | Sbjct 5489 GCATGCAGATATCTTCGATTTCATCGATATCCGGATGAACCATGGTAAGGAAGAGATTAG 5548 Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGC 363986 || |||||| ||||| || |||||| || |||| | ||| |||||||| ||||| | Sbjct 5549 AGCCCGTGATTTGTTCCCAGCTCTTTGGATTCCTGATCTTTTCATGAAGCGTGTGGAAGA 5608 Query 363987 AGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGG 364046 | | ||| | | || | || ||| ||| || ||||||||||| | || Sbjct 5609 AAATGGTCCATGGACTTTGTTCTCACCTTCTGAAGCTCCTGGCCTTTCCGATGTCTACGG 5668 Query 364047 TGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGC-TCGTAAGACAA 364105 ||| || | | | ||| || |||||| | |||| | | | ||| | || Sbjct 5669 TGATGAGTTCGAAAAATTGTACACCAAATATGAA----AAGGAAGGTCGTGGTAGAAGAA 5724 Query 364106 TTCCC---GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACAC 364162 | | ||||| ||||| |||| | || |||| | || | ||| || || || | Sbjct 5725 CTGTCAAGGCACAAAAGCTTTGGTATCAGATTTTGGAGGCCCAAACTGAAACTGGTACTC 5784 Query 364163 CCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAA 364222 | | ||| | ||||||||| | || ||| | ||| || || || | || ||||| | Sbjct 5785 CATTCATGATCTACAAAGATGCTTGTAACAGAAAGAGTAATCAAAAGAATCTCGGTACTA 5844 Query 364223 TTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACC 364263 || || |||| |||| ||| || |||||||| || Sbjct 5845 TTAAGTCATCCAACTTATGCTGTGAGGTTGTTGAATACTCC 5885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303350610839978