Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 7e-17
seq110 100 2e-16
>seq1
Length=504328
Score = 102 bits (112), Expect = 7e-17
Identities = 165/235 (70%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 115279 ATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA 115338
||| | |||||||||||| || || || | ||||| || ||||||||| | ||| ||
Sbjct 435307 ATTTAGAATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACCATTACCTTGGAAGTCGA 435248
Query 115339 GTCCAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCG 115397
||| ||||| || ||||| || || || || ||| ||||| || || ||||
Sbjct 435247 GTCTTCTGACACCATT-GACAATGTCAAGCAGAAGATTCAGGATAAGGAGGGAATCCCAC 435189
Query 115398 TTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCG 115457
|||||| || ||| | |||| || || || || || ||||| | | ||| | | |
Sbjct 435188 CTGATCAACAGAGATTGATTTTCGCTGGTAAGCAGTTGGAAGACGGTAGAACTCTTTCTG 435129
Query 115458 ATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|||| ||||| ||||| ||||| ||| | || |||| | |||||| |||| ||
Sbjct 435128 ATTACAACATCCAAAAGGAGTCCACTCTTCACTTGGTTCTTAGATTGAGAGGTGG 435074
>seq110
Length=92542
Score = 100 bits (110), Expect = 2e-16
Identities = 164/234 (70%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|| ||||||||||| || || || || || || || || || ||| | || |||||
Sbjct 53131 AAGATGCAAATTTTCGTTAAGACCCTTACAGGTAAGACTATCACCTTGGAGGTCGAGTCT 53072
Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401
||||| | | ||||| || || ||||| || ||||| ||||| | || |||
Sbjct 53071 TCGGACAC-GATCGACAATGTCAAGCAAAAGATCCAGGATAAGGAAGGAATTCCACCTGA 53013
Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461
||| || ||| | || | ||| || ||||| || ||||||| || ||| | | |||||
Sbjct 53012 TCAACAGAGATTGATCTTTGCTGGTAAACAGTTGGAAGATGGCAGAACTCTTTCTGATTA 52953
Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515
|| ||||| || || ||||| | || |||| ||||||||| |||| || ||
Sbjct 52952 CAATATTCAGAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGTAA 52899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425343072085480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |