Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq110 125 6e-24
>seq110
Length=92542
Score = 125 bits (138), Expect = 6e-24
Identities = 168/232 (72%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| | || ||||| | ||||| | || || ||||| ||
Sbjct 53128 ATGCAAATTTTCGTTAAGACCCTTACAGGTAAGACTATCACCTTGGAGGTCGAGTCTTCG 53069
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| ||||| || || |||||||| ||| || || ||||| ||||||||||| |
Sbjct 53068 GACACGATCGA--CAATGTCAAGCAAAAGATCCAGGATAAGGAAGGAATTCCACCTGATC 53011
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
||||| | | || ||||| || ||||| || ||||||| | ||| | |||||||
Sbjct 53010 AACAGAGATTGATCTTTGCTGGTAAACAGTTGGAAGATGGCAGAACTCTTTCTGATTACA 52951
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAA 25228
||||||| || ||||| || || || || || | || | ||||| || ||
Sbjct 52950 ATATTCAGAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGTAA 52899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327054667885
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |