Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1 176 8e-39 seq110 154 3e-32 >seq1 Length=504328 Score = 176 bits (194), Expect = 8e-39 Identities = 165/210 (79%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| || |||||||| ||||||||||| ||||| || || || || || ||||| Sbjct 435092 ACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAATCAGAAAGAGTTCTACCGTCTTCC 435151 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 |||||||| || ||||| || | ||| ||||| || ||||| || || ||||| || ||| Sbjct 435152 AACTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGTGGGATTCCCTCCTTATCCTGA 435211 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| |||||| || |||||||| | || || ||||||||||| ||||| || Sbjct 435212 ATCTTCTGCTTGACATTGTCAATGGTGTCAGAAGACTCGACTTCCAAGGTAATGGTCTTA 435271 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||||| | |||||| ||||| || |||||| Sbjct 435272 CCCGTCAAGGTCTTAACGAAAATTTGCATT 435301 >seq110 Length=92542 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| || || || || || || || || ||||| || || || || ||||| Sbjct 52916 CAAGACCAAGTGAAGGGTAGATTCCTTCTGAATATTGTAATCAGAAAGAGTTCTGCCATC 52975 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| ||||| || || || || || | ||| ||||| || |||||||| |||||||| || Sbjct 52976 TTCCAACTGTTTACCAGCAAAGATCAATCTCTGTTGATCAGGTGGAATTCCTTCCTTATC 53035 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 || |||||| |||||| ||||| ||||| | || || || ||||||||||| || Sbjct 53036 CTGGATCTTTTGCTTGACATTGTCGATCGTGTCCGAAGACTCGACCTCCAAGGTGATAGT 53095 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || |||||||| ||||| || ||||| Sbjct 53096 CTTACCTGTAAGGGTCTTAACGAAAATTTGCAT 53128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921620337869880