Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq1 176 8e-39
seq110 154 3e-32
>seq1
Length=504328
Score = 176 bits (194), Expect = 8e-39
Identities = 165/210 (79%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || |||||||| ||||||||||| ||||| || || || || || |||||
Sbjct 435092 ACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAATCAGAAAGAGTTCTACCGTCTTCC 435151
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
|||||||| || ||||| || | ||| ||||| || ||||| || || ||||| || |||
Sbjct 435152 AACTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGTGGGATTCCCTCCTTATCCTGA 435211
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| |||||| || |||||||| | || || ||||||||||| ||||| ||
Sbjct 435212 ATCTTCTGCTTGACATTGTCAATGGTGTCAGAAGACTCGACTTCCAAGGTAATGGTCTTA 435271
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462
||||| | |||||| ||||| || ||||||
Sbjct 435272 CCCGTCAAGGTCTTAACGAAAATTTGCATT 435301
>seq110
Length=92542
Score = 154 bits (170), Expect = 3e-32
Identities = 162/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || || || || || || || || ||||| || || || || |||||
Sbjct 52916 CAAGACCAAGTGAAGGGTAGATTCCTTCTGAATATTGTAATCAGAAAGAGTTCTGCCATC 52975
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| ||||| || || || || || | ||| ||||| || |||||||| |||||||| ||
Sbjct 52976 TTCCAACTGTTTACCAGCAAAGATCAATCTCTGTTGATCAGGTGGAATTCCTTCCTTATC 53035
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|| |||||| |||||| ||||| ||||| | || || || ||||||||||| ||
Sbjct 53036 CTGGATCTTTTGCTTGACATTGTCGATCGTGTCCGAAGACTCGACCTCCAAGGTGATAGT 53095
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || |||||||| ||||| || |||||
Sbjct 53096 CTTACCTGTAAGGGTCTTAACGAAAATTTGCAT 53128
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921620337869880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |