Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq173 201 2e-46
>seq173
Length=13397
Score = 201 bits (222), Expect = 2e-46
Identities = 491/731 (67%), Gaps = 21/731 (3%)
Strand=Plus/Plus
Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483
||||||||||||| || || || || | ||| |||||||| ||||| | ||||||
Sbjct 10755 TGGCCTTCTTCGCAGCATCCGATGGATTGGTCGATGAGAACTTGGCCCAGAACTTCATGC 10814
Query 42484 AAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACG 42543
| |||| ||| |||||| | ||||||||||||||||| | |||||
Sbjct 10815 AGCAGGTTCAGCTGCCTGAGGCAAGAGCATTCTACGGCTTCCAGATCATGGTTGAGAATA 10874
Query 42544 TGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTA 42603
| ||||| ||| |||| | | |||| | || ||| || ||| || | |
Sbjct 10875 TTCACTCCGAGACGTACTCTCTATTGCTTGAGACCTACGTCACCGATAA----GAAGGAA 10930
Query 42604 ACGGGCT----GTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGG 42659
||| || |||||| ||||| ||||| || || |||||| | ||||| |||
Sbjct 10931 TCGGACTACTTGTTCAATGCCATCGAGACCATTCCACCTATCAAGGAAAAGGCACTGTGG 10990
Query 42660 GCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACC 42719
|| || ||||| | | ||||| || || |||||| |||| |||||| |
Sbjct 10991 GCATACAGATGGATGAATAACAAGGACGCCTTGTACGCCGAGAGATTGGTTGCCTTTGCA 11050
Query 42720 GCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-A 42778
||| ||||||| | |||||||| || | || || || ||||||||| | ||| ||| |
Sbjct 11051 GCCATCGAGGGTGTGTTCTTCTCCGGATCGTTTGCTTCGATCTTCTGGTTGAAGAAGAGA 11110
Query 42779 GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCA 42838
||| | |||||| || || || ||||||||||| || ||| ||||||| ||||| || ||
Sbjct 11111 GGTTT-GATGCCAGGTCTTACATTCTCGAACGAGCTTATCTGCAGGGATGAGGGTCTACA 11169
Query 42839 TAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGC- 42897
| |||||| ||||||||||| ||||| ||| | | ||| ||| | | || |
Sbjct 11170 CACGGACTTCGCCTGCCTCCTATTCTC---ACACTTGAAGCA-TCCTCCTAGTAAGACCA 11225
Query 42898 GGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGC 42957
|| | ||||| ||||||||||| || |||||||| ||||| || | || |||
Sbjct 11226 TCATCAAGAGAATCATGACGGAGGCCGTCGATATCGAGAA-GAGTTTCTGGAG-AGACGC 11283
Query 42958 --TGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGT 43015
| || || || || | || |||||| ||| | ||||| | ||| | | | |
Sbjct 11284 ATTACCTGTTTCGTTGTTGGGTATGAACTGCGATATGATGTGTGAATACGTTGACTTCTG 11343
Query 43016 CGCCGAC-CATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCT 43074
|||||| || | || | || | | || | |||||||| | | || |
Sbjct 11344 TGCCGACAGATTGCTGGTCTCTCTCGGATGTGAGAAG-GTCTACAACGCCAAGAATCCAT 11402
Query 43075 TCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCG 43134
| || || ||||||||||| ||||||| || ||||| ||||| ||||||||| | ||
Sbjct 11403 TTGATTTCATGGAGAACATTTCGTTGGCAGGAAAGACGAACTTCTTCGAGAAGAGGGTGT 11462
Query 43135 CCGACTACCAG 43145
|||| || |||
Sbjct 11463 CCGATTATCAG 11473
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944337087041040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |