Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq110 93.3 1e-13 >seq110 Length=92542 Score = 93.3 bits (102), Expect = 1e-13 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || ||||| || || | || || | || ||||| || ||||| || || || Sbjct 52937 TTCCTTCTGAATATTGTAATCAGAAAGAGTTCTGCCATCTTCCAACTGTTTACCAGCAAA 52996 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGT 288400 ||||| | ||||||| | ||| |||||||| ||||||||||| ||| || || || | Sbjct 52997 GATCAATCTCTGTTGATCAGGTGGAATTCCTTCCTTATCCTGGATCTTTTGC-TTGACAT 53055 Query 288401 TTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA 288460 | || || | || || || || || | ||||| ||||| || || || ||||| | Sbjct 53056 TGTCGATCGTGTCCGAAGACTCGACCTCCAAGGTGATAGTCTTACCTGTAAGGGTCTTAA 53115 Query 288461 CGAATATCTGCAT 288473 |||| || ||||| Sbjct 53116 CGAAAATTTGCAT 53128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179651694536362