Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq1 98.7 1e-15
seq110 96.9 4e-15
>seq1
Length=504328
Score = 98.7 bits (108), Expect = 1e-15
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | | ||||| || | ||| ||||||||| || ||||||||||
Sbjct 435073 ACCACCTCTCAATCTAAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAATCAGA 435132
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||||| | |||| || | ||||||||||||||| || | || ||| || || | |||
Sbjct 435133 AAGAGTTCTACCGTCTTCCAACTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGTGG 435192
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| | |||||| ||| || || || |||| | | | ||||| || || ||
Sbjct 435193 GATTCCCTCCTTATCCTGAATCTTCTGCTTGACATTGTCAATGGTGTCAGAAGACTCGAC 435252
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
|| | || ||||| || ||||| | ||||| || || |||||||||
Sbjct 435253 TTCCAAGGTAATGGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATT 435301
>seq110
Length=92542
Score = 96.9 bits (106), Expect = 4e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | ||| ||||| || | || ||||| ||||||||||||||||
Sbjct 52901 ACCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTCTGAATATTGTAATCAGA 52960
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||||| | | || || | ||| |||||||| || || | || ||| || || | |||
Sbjct 52961 AAGAGTTCTGCCATCTTCCAACTGTTTACCAGCAAAGATCAATCTCTGTTGATCAGGTGG 53020
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| | ||||| ||| ||| ||||| |||| | | | |||||| || || ||
Sbjct 53021 AATTCCTTCCTTATCCTGGATCTTTTGCTTGACATTGTCGATCGTGTCCGAAGACTCGAC 53080
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211
|| | ||||| || || || || || ||||| || || |||||||| ||
Sbjct 53081 CTCCAAGGTGATAGTCTTACCTGTAAGGGTCTTAACGAAAATTTGCATCTT 53131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543211584561360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |