Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq115 105 7e-18
>seq115
Length=359903
Score = 105 bits (116), Expect = 7e-18
Identities = 281/428 (66%), Gaps = 1/428 (0%)
Strand=Plus/Plus
Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957
|| ||| ||||||| || || || || || ||||||||||| |||||| || | |
Sbjct 5184 CCAACCTTGTTCAATGCAGGTACTCCTAGACCTCAGATGTCTTCATGTTTCTTGGTTGCC 5243
Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017
| || | ||||||||| || || | ||| | | ||| | || || || ||
Sbjct 5244 ATGAAAGATGACTCCATCGAAGGTATCTACGATACTTTGAAGCAGTGCGCTTTAATTTCT 5303
Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077
||| ||| || || ||||| || | |||| || | ||||| | || || |||||
Sbjct 5304 AAAACCGCCGGTGGTATCGGTATGCATATCCATAACATTCGTGCTACTGGCTCATACATT 5363
Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137
||||||||||| || || || || || | |||||| | || |||||||||| |
Sbjct 5364 GCAGGTACCAATGGTACTTCTAATGGTATCATTCCTATGATTCGTGTCTTCAACAGTACT 5423
Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197
|| | || || || || |||||| | | | ||| | | || |||||| | ||
Sbjct 5424 GCCAGATATGTCGATCAAGGTGGTAACAAGCGTCCTGGTGCCATTGCCGTCTATTTGGAA 5483
Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257
|| ||||| || || | | ||||||||| | || | |||||| || || || |
Sbjct 5484 CCTTGGCATGCAGATATCTTCGATTTCATCGATATCCGGATGAACCATGGTAAGGAAGAG 5543
Query 94258 GAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTC 94317
|| ||| | || | ||| ||||| ||| | || || ||||| ||||| || ||
Sbjct 5544 ATTAGAGCCCGTGATTTGTTCCCAGCTCTTTGGATTCCTGATCTTTTCATGAAGCGTGTG 5603
Query 94318 G-AGaaaa 94324
| ||||||
Sbjct 5604 GAAGAAAA 5611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494722093056840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |