Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1 100 3e-16 >seq1 Length=504328 Score = 100 bits (110), Expect = 3e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| ||||| || || ||||| | |||| || | |||||| || ||||| Sbjct 435109 CTCCTTTTGGATGTTGTAATCAGAAAGAGTTCTACCGTCTTCCAACTGCTTACCAGCGAA 435168 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| | ||| || || | || | | |||||| ||| ||||||| ||||| | Sbjct 435169 AATCAATCTCTGTTGATCAGGTGGGATTCCCTCCTTATCCTGAATCTTCTGCTTGACATT 435228 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || || || |||| || ||||| || ||||||| || ||||| Sbjct 435229 GTCAATGGTGTCAGAAGACTCGACTTCCAAGGTAATGGTCTTACCCGTCAAGGTCTTAAC 435288 Query 46582 AAAGATTTGCATT 46594 || ||||||||| Sbjct 435289 GAAAATTTGCATT 435301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237135279080