Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= NC_014457.1 Length=59199 Score E Sequences producing significant alignments: (Bits) Value seq51 86.0 2e-12 >seq51 Length=2099 Score = 86.0 bits (94), Expect = 2e-12 Identities = 174/253 (69%), Gaps = 8/253 (3%) Strand=Plus/Plus Query 34559 TATGGTGAATATCAAAAAGAGATGAATATGCTAAATAAAGCATTCTATGAAGTTATGCTA 34618 |||| ||| | ||| || ||| |||||||||||| ||||||| ||| |||||| | Sbjct 1081 TATGATGACTTTCAGGTTGAAATGGATATGCTAAATACCGCATTCTGTGAGGTTATGATT 1140 Query 34619 CATGGTGATGCATTAGGAAAACCATTTGCATATCCGATACCAACATTTAGTAT-TATGAA 34677 || || |||||| || | |||| | || || ||||||| || ||| | |||| Sbjct 1141 CAAGGGGATGCAAATGGCAGCATATTTAGTTTCCCTATCCCAACATATAATATCTTTGAA 1200 Query 34678 TGGATTTGATTGGGA---TAACCCAAATAATGCAGATTTATGGAAAATGACTGGTAAATA 34734 |||||||||||||| | | | ||||| || ||| ||| | ||| ||| ||||| Sbjct 1201 -GGATTTGATTGGGAAGCTGAGCGGAATAA-GCCAATT--TGGGAGATGTCTGCCAAATA 1256 Query 34735 TGGCTACCCATATTTCAGTAATTTTATGAATAGCGATATGGACCCAAGTGATGTAAGAAG 34794 ||| || ||||| ||| || |||||||| ||| | || || |||| | | Sbjct 1257 TGGAATTCCCTATTTTGCTAACTTCATGAATAGTGATTTAGATCCTGATGATTTCCGCTC 1316 Query 34795 TATGTGCTGTAGA 34807 ||||||||| || Sbjct 1317 AATGTGCTGTCGA 1329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189314797586878