Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_014457.1
Length=59199
Score E
Sequences producing significant alignments: (Bits) Value
seq51 86.0 2e-12
>seq51
Length=2099
Score = 86.0 bits (94), Expect = 2e-12
Identities = 174/253 (69%), Gaps = 8/253 (3%)
Strand=Plus/Plus
Query 34559 TATGGTGAATATCAAAAAGAGATGAATATGCTAAATAAAGCATTCTATGAAGTTATGCTA 34618
|||| ||| | ||| || ||| |||||||||||| ||||||| ||| |||||| |
Sbjct 1081 TATGATGACTTTCAGGTTGAAATGGATATGCTAAATACCGCATTCTGTGAGGTTATGATT 1140
Query 34619 CATGGTGATGCATTAGGAAAACCATTTGCATATCCGATACCAACATTTAGTAT-TATGAA 34677
|| || |||||| || | |||| | || || ||||||| || ||| | ||||
Sbjct 1141 CAAGGGGATGCAAATGGCAGCATATTTAGTTTCCCTATCCCAACATATAATATCTTTGAA 1200
Query 34678 TGGATTTGATTGGGA---TAACCCAAATAATGCAGATTTATGGAAAATGACTGGTAAATA 34734
|||||||||||||| | | | ||||| || ||| ||| | ||| ||| |||||
Sbjct 1201 -GGATTTGATTGGGAAGCTGAGCGGAATAA-GCCAATT--TGGGAGATGTCTGCCAAATA 1256
Query 34735 TGGCTACCCATATTTCAGTAATTTTATGAATAGCGATATGGACCCAAGTGATGTAAGAAG 34794
||| || ||||| ||| || |||||||| ||| | || || |||| | |
Sbjct 1257 TGGAATTCCCTATTTTGCTAACTTCATGAATAGTGATTTAGATCCTGATGATTTCCGCTC 1316
Query 34795 TATGTGCTGTAGA 34807
||||||||| ||
Sbjct 1317 AATGTGCTGTCGA 1329
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 189314797586878
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |