Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq126 527 5e-144 seq140 497 8e-135 seq127 239 3e-57 seq21 125 5e-23 seq53 98.7 8e-15 seq171 95.1 9e-14 seq115 95.1 9e-14 >seq126 Length=356038 Score = 527 bits (584), Expect = 5e-144 Identities = 1030/1503 (69%), Gaps = 24/1503 (2%) Strand=Plus/Minus Query 517174 CATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAATAGTAATATTCTT 517233 |||||| ||||| | || | || ||||| || || ||| || || ||||| |||| Sbjct 229693 CATTCTATCAATCTCCTCCTTGGACAATCTACCCTTATCATTGGTGATGGTAATCTTCT- 229635 Query 517234 GGATTTGTT--TGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAA 517291 || || || ||| ||| || | |||| ||||| | |||||||||||||| | | Sbjct 229634 -GACTTTTTCCTGTACCTTTCTCCACTGCAGAGACATTCAATATACCATTGGCATCGATA 229576 Query 517292 TCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTA 517351 || || || ||||||||||| || || ||||| | || || || || || ||| | | Sbjct 229575 TCGAAAGTAACTTCAATTTGTGGAACACCTCTTGGTGCTGGAGGAATACCAGTCAACTCA 229516 Query 517352 AATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATA 517411 ||| | || | || |||||||| || ||| |||||| || || | || || Sbjct 229515 AATTTACCTAACAAGTTGTTATCTTTGGTCTTCGTTCTTTCACCTTCAAACACCTGAATC 229456 Query 517412 GTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG-GATTTTTTACAAGGAAT 517470 ||| | | ||| ||||| | |||||| | || | ||| |||||||| |||||||| Sbjct 229455 AAAACGCCCGGTTGGTTATCAGCATAAGTAGAGAAGA-TCTCAGATTTTTTGCAAGGAAT 229397 Query 517471 TGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGA 517530 ||| | ||||| | ||| | |||||||||| ||||||||| ||||| | ||||||||| Sbjct 229396 TGTAGAATTTCTCTTAATCAACTTGGTCATAACACCACCTGCGGTTTCAATACCAAGAGA 229337 Query 517531 AAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGT-TTGACCAACAA 517589 | ||||||||||| | || | | || || ||| ||| | | | | ||| | Sbjct 229336 CAACGGAGTGACATCTAAAAGCAATAAATCCTG-AGTCTTTGAAGAATCGTCACCGGTCA 229278 Query 517590 GAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCAT 517649 |||||||| || | || ||||| || ||||| || ||||||||||| | || || | Sbjct 229277 ATATAGCTGCCTGGACGGCTGCACCGTAGGCAACTGCCTCATCAGGATTGATAGATTTGT 229218 Query 517650 TTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGAT 517708 | | | ||||||||||| || | |||| | || ||| || || ||||| | | Sbjct 229217 TCAACTCCTTACCATTGAAGAATTCAGAAACCAATT-TCTGAACTTTTGGAATTCTCGTA 229159 Query 517709 GATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAA 517768 || || ||||| | |||||||| | || || || || |||||||| ||||| ||| Sbjct 229158 GAACCACCAACCAGAACAATTTCGTCAACTTGGGACTTGTCCAGTTTAGAATCTCTCAAA 229099 Query 517769 ACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTA 517828 ||||| || || || || | | | ||||||||| || | |||||||| || ||| | Sbjct 229098 ACTTTCTCTACTGGATCCAAAGTTGATCTAAACAAATCAGCGCAAAGTTCCTCAAATCTT 229039 Query 517829 GCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTA 517888 || | || | || || ||||||||||||| | | ||||||| ||||| || Sbjct 229038 GCACGCGTGATAGAAGTATAGAAATCAATTCCTTCATAAAGGGAATCAATTTCAACCGAG 228979 Query 517889 GTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGT 517948 || |||| ||||| || || | | || || | || || || || |||| ||||| | Sbjct 228978 GTCTGAGCAGAAGACGAAAGAGTTCTCTTGGCTCTCTCGCAAGCAGTTCTTAATCTTCTT 228919 Query 517949 AAGGCT-TTTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACA 518007 || ||| |||| | | | ||||||| | | |||||||||||||| |||| || | Sbjct 228918 AAAGCTCTTTGATTACCG-GTCAAATCCTTGTGGTATTTTCTCTTGAACTCTTGTGCAAA 228860 Query 518008 CCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGC 518067 | ||||| | ||||| ||||||||||| ||||| | ||||| |||| || || Sbjct 228859 GTGATTAACAAGTCTGTTATCGAAATCTTCACCACCCAAGTGAGTATCACCTGCAGTTGC 228800 Query 518068 TCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACC 518127 | | || | || | || || || | ||||| | | ||||| ||| |||||||| Sbjct 228799 TTTAACCTCAAATATACCTTCATCGATCGACAACAACGAAACATCGAAGGTACCACCACC 228740 Query 518128 CATATCAAAAATAAGTACATTCATTTCTTTGTC-TTGG-----TTTTTATCAAGACCATA 518181 || |||||| || | | |||| | || || || | || || | | || || Sbjct 228739 CAAATCAAAGATCAAAATATTCTTGTCACCTTCATTCGAACCCTTCTTGTTTAATCCGTA 228680 Query 518182 CGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCT 518241 |||| ||||| ||||| || ||||| |||||||||| ||||| || || |||||| | Sbjct 228679 AGCAATGGCAGCTGCAGTAGGCTCATTGATAATTCTCATCACATTCAGTCCGGCAATTGT 228620 Query 518242 TCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAAC 518301 |||||||| || || || ||||| || |||||||| || || || ||||| || | ||| Sbjct 228619 ACCTGCATCCTTGGTTGCCTGTCTCTGCGAATCGTTGAAGTAAGCTGGAACGGTGACAAC 228560 Query 518302 GGCATCAGTTACTTCTTTACCAATATAAGCGCTT--GCCGTTTGTTTCATTTTACTTAAA 518359 |||||| | |||| | ||| || || |||| || |||| |||||||| ||||| Sbjct 228559 GGCATCTTTCACTTTATCACC--TAAAAATGCTTCAGCGGTTTCCTTCATTTTGGTTAAA 228502 Query 518360 ATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCA-TTTTGATATGATACTTC 518418 | ||| || || || | ||||| | | ||||| ||| |||| || || | Sbjct 228501 ACCATGGAAGATATCTCCTCTGGAGTGAAACTCTTGGTCTCACCCTTGA-ATTCAACCTG 228443 Query 518419 AAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTG 518478 || | ||| || ||||||||| ||||| || || ||||| | |||||||| ||| Sbjct 228442 AACCTTTGGCTTTCCACCAACATTGATAACCTTGAAAGGCCAATTCTTCATATCATTTTG 228383 Query 518479 AACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGT 518538 ||| | ||| || | | |||||| || | || || ||||| || | || || || Sbjct 228382 AACCTCATCGTCGTTGTATTTTCTACCGATAAGTCTCTTGGCATCGAAGACGGTGTTTGT 228323 Query 518539 TGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAA 518598 ||||| || ||||| || | || || || || || |||| || || ||||| || Sbjct 228322 AGGATTCATAGCAGCCTGGTTCTTTGCGGCCTCACCGATCAACCTCTCGGTGTCTGTGAA 228263 Query 518599 TGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACC 518658 | |||||| ||||| || || | |||||||||||||| |||||||| || ||| | | Sbjct 228262 GGCAACATAAGATGGTGTCGTCCTGTTACCTTGATCATTTGCAATAATATCCACTCTGTC 228203 Query 518659 ATT 518661 ||| Sbjct 228202 ATT 228200 >seq140 Length=46691 Score = 497 bits (550), Expect = 8e-135 Identities = 1079/1591 (68%), Gaps = 28/1591 (2%) Strand=Plus/Plus Query 517132 TTTCTTGTTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATC 517191 || ||| ||||| | || | || | || ||| || || ||| | || |||| || Sbjct 13089 TTCCTTCTTATCGTCATCCTTGAACTTTTCAGCCTCGGAAACCATCTTATCGATTTCTTC 13148 Query 517192 TTCAGAGAATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTT 517251 | ||| ||||| || || || || |||||||| || | ||||| || || Sbjct 13149 CTTAGACAATCTACCCTTATCGTTGGTGATAGTAATCTTTTGAGATTTACCAGTACCCTT 13208 Query 517252 ATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTG 517311 ||| |||||| ||| || | ||||||||||||||| | ||| || || ||||||||||| Sbjct 13209 CTCAACGGCAGACACGTTCAAAATACCATTGGCATCAATATCGAAGGTAACTTCAATTTG 13268 Query 517312 AGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATT 517371 || || ||||| | || ||||| || || ||| | ||| | |||| | || || Sbjct 13269 TGGAACACCTCTTGGTGCTGGTGGAATACCAGACAATTCAAACTTACCCAACATGTTGTT 13328 Query 517372 ATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATC 517431 ||| ||||| ||| |||||| ||||| | || || || | | || || || Sbjct 13329 ATCCTTAGTCTTAGTTCTTTCACCTTCGAACACCTGAATCAACACACCTGGCTGGTTGTC 13388 Query 517432 TGAATAAGTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAA 517490 | || || | || | ||| || || ||||| ||||| || | ||||| || | Sbjct 13389 GGCGTAGGTAGAGAAGA-TCTCAGACTTCTTACATGGAATAGTCGAATTTCTTGGGATCA 13447 Query 517491 TATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTA 517550 |||||||| | |||||| || ||||| | ||||||||| | || || ||||| | | Sbjct 13448 ACTTGGTCATCACACCACCGGCAGTTTCAATACCAAGAGACAATGGGGTAACATCCAAAA 13507 Query 517551 GGACAATATTTTGAAGTTTTTCATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCA 517609 | | | | |||| |||||| | | | | |||| |||||| || || |||| ||| Sbjct 13508 GCAACAAGTCTTGA-GTTTTTGAAGACTCGTCACCAGAAAGAATGGCGGCCTGAACGGCA 13566 Query 517610 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 517669 |||||||| |||||||| |||||||| || | | | ||| | | ||||| ||||| Sbjct 13567 GCACCATAAGCAACAGCCTCATCAGGGTTGATGGACTTGTTTGGCTGCTTACCGTTGAAG 13626 Query 517670 AAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATT 517729 || | |||| | | | ||||| ||||| | | || || || || || || || Sbjct 13627 AAGTCAGAAACCAACTTTTGAACCTTTGGAATTCTGGTAGAACCACCGACCAAAACGATC 13686 Query 517730 TCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGA 517789 || | | || || || |||| || | ||| ||||| || | ||| || || | | Sbjct 13687 TCGTCAATTTGAGACTTGTCCAACTTGGCATCTTTCAAAACCTTCTGAACAGGGTCCAAA 13746 Query 517790 CCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTA 517849 | ||| |||| || ||||| || ||||||||| | ||||| || | || | || Sbjct 13747 GTGGATCTGAACAGATCGGAACAGAGCTCTTCGAATCTGGCTCTGGTGATAGA-AGTGTA 13805 Query 517850 TAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAG 517908 || ||||| |||||| |||||||||| | |||| | ||||| | ||||| || || Sbjct 13806 GAAGTCAATACCTTCGTACAAAGAATCGATCTCAACTGAGGTTTGTGCAGAAGAGGAAAG 13865 Query 517909 TGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--A 517966 | | ||||| | || ||||| || || | ||||| || ||| | ||| || | Sbjct 13866 AGTTCTCTTAGCTCTCTCGCATGCAGTTCTCAATCTTCTCAAAGCTCT--CTGGTTACCA 13923 Query 517967 TTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTA 518026 ||||||| | | |||||||||||||| || | | | ||| || | | ||| Sbjct 13924 GTCAAATCCTTGTGGTATTTTCTCTTGAATTCGTTAGAGAAGTGTGTAACCAATCTGTTA 13983 Query 518027 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 518086 || ||||||||||| ||||| | ||||| || | || || | |||| ||| | ||| Sbjct 13984 TCGAAATCTTCACCACCCAAGTGAGTATCACCAGCAGTGGCCTTGACTTCGAAGATACCA 14043 Query 518087 TCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 518146 || || | ||| | | || ||||| || |||||||||| ||| || || | ||| Sbjct 14044 TCCTCGATAGAAAGCAAAGAAACATCGAAAGTACCACCACCCAAATCGAAGATCAAAACA 14103 Query 518147 TTCATTTC---TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 518203 || | || || | || |||| |||| |||||| |||| || || || || || Sbjct 14104 TTGTTCTCACCTTCGGATT--TTTTGTTCAA-ACCATAAGCAATGGCTGCTGCGGTAGGC 14160 Query 518204 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 518263 || ||||| ||||||| |||||| | ||||||||| | || ||||||||||| || ||| Sbjct 14161 TCGTTAATGATTCTCATAACATTCAAACCAGCAATAGTACCGGCATCTTTAGTTGCCTGT 14220 Query 518264 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCA 518323 || || || ||||| || || |||||||| |||| ||| ||||| | || || ||| Sbjct 14221 CTCTGGGAGTCGTTGAAGTAAGCAGGAACGGTAACAACAGCATCCTTAACATCGGAACCC 14280 Query 518324 ATATAAGCGCTT--GCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG 518381 | | || |||| || ||||| ||||| || | | || ||| |||||||||| || | Sbjct 14281 A-AGAA-TGCTTCAGCGGTTTGCTTCATCTTGATAAGAACCATAGATGAAATTTCCTCAG 14338 Query 518382 GGGAATATTGCTTGGATTCA-TTTTGATATGATACTTCAAAATATGGTTTATTACCAACA 518440 | | | ||||| |||| ||| ||| || |||| | ||| || ||||||| Sbjct 14339 GAGTGAAAGTCTTGGTTTCACCCTTGTACTGA-ACCTCAATCTTTGGCTTTCCACCAACA 14397 Query 518441 TTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT 518500 | || ||| || || ||||||| |||||||| || || || |||| | | Sbjct 14398 TCAACAACCTTGAAAGGCCAGTGCTTCATATCACTCTGGACTTCTTCGTCAGCGTATTTA 14457 Query 518501 CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATAT 518560 | |||||| | || || ||||| || | ||| |||||||| || || ||||| |||| Sbjct 14458 CGACCAATAAGTCTCTTAGCATCGAAGACAGTGTTGGTTGGGTTCATAGCAGCCTGATTC 14517 Query 518561 TTGGCTGCATCTCCAATCAGATGT-TCTGTCTCTGTAAATGAAACATATGATGGAGTTGT 518619 ||||| || || ||||||| || | || || || ||||||| ||||||||| || || || Sbjct 14518 TTGGCAGCCTCACCAATCA-ATCTCTCGGTATCGGTAAATGCAACATATGAAGGGGTGGT 14576 Query 518620 GCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATA--CACCTACA 518677 | |||||||| ||||| |||||||| |||||| | || ||| || | ||| ||| Sbjct 14577 TCTGTTACCTTGGTCATTGGCAATAATGTCAACTCTGTCA--TTGGCAAAGTGACCAACA 14634 Query 518678 CAACTAAAAGTTGTTCCTAAATCAATACCAA 518708 || | || || || |||||||| |||| Sbjct 14635 CATGAGTACGTAGTACCCAAATCAATTCCAA 14665 >seq127 Length=61007 Score = 239 bits (264), Expect = 3e-57 Identities = 956/1478 (65%), Gaps = 43/1478 (3%) Strand=Plus/Minus Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309 |||||| ||| | || || | || || |||| ||| | | |||||||| |||||| Sbjct 15017 TTATCAATGGCTGAGACCTTCAAGATTCCGTTGGAATCAAGAGTGAATGTGACCTCAATT 14958 Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 517369 ||||| || ||||| | || | |||||| || | ||| | ||| | |||| || Sbjct 14957 TGAGGAACACCTCTTGGTGCGGATGGGATACCATTCAATTCAAACTTACCCAACAAGTTG 14898 Query 517370 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGAT-- 517427 || | |||| | || ||||||||| ||| || || ||| || ||||| | Sbjct 14897 TTCTTCTTAGCCATGACTCTCTCACCCTCGTAAACCTGAATC--AAC-ACGGTTTGTTGG 14841 Query 517428 -TATCTGAATAAGTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATC 517485 |||| | ||| | || | |||| || || || ||||| | |||||||| | Sbjct 14840 TTATCAACAGCAGTAGAGAAGA-TCTGAGACTTCTTTGTTGGAATAGGAGTGTTTCTCTT 14782 Query 517486 AATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATC 517545 ||| | | | ||||||| |||||| | ||||| | ||| |||| | |||| | ||||| Sbjct 14781 AATCAAAGTTGTCATAACACCACCAGAGGTTTCAATACCCAGAGTCAAAGGATTAACATC 14722 Query 517546 AACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAAT 517605 || | || |||| || || ||| ||| | || |||| | |||| |||| Sbjct 14721 AATCAAAACGATATCTTCAACACCTTCTTCACCT-GAG-----AGAACACCTGCCTGAAC 14668 Query 517606 AGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATT 517665 || |||||||| |||||||||||||| || || | | | | | || ||||| || Sbjct 14667 GGCTGCACCATAGGCAACAGCTTCATCTGGGTTGATACTCTTCGAAACCTTCTTACCCTT 14608 Query 517666 GAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATAC 517725 ||| ||| | | ||| | | ||||| ||||| | | || || ||||| || || Sbjct 14607 GAAGAAAGTCTCTAAAAGCTCTTGAACCTTTGGAATTCTGGTAGAACCACCAACCAAGAC 14548 Query 517726 AATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGG-TT 517784 || |||| | | |||| | || || ||||| ||||||| ||| || || Sbjct 14547 AACATCATCAATTTCAGATTCTTTCACCTTAGAATCTTTCAAAACTTGGCGAACTGGCTT 14488 Query 517785 CAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGA 517844 ||| | || |||| ||||| | | ||| |||||||| |||||||| | ||| Sbjct 14487 CAATGTCTTCT-TAAATAAGTCCATATTCAATTCCTCGAATTTGGCTCTAGTCAAAGTCT 14429 Query 517845 CATTATAA-TCAATTCCTTCGAACAAA-GAATCAACTTCAATCGTAGTTTGAGTCGAAGA 517902 | | | || ||| || || |||||| ||||||| ||||| | || | ||| Sbjct 14428 C-TGAGAAGTCATGACCATC-AACAAATGAATCAATCTCAATTCTGGTAGACATTTGAGA 14371 Query 517903 AGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGA 517962 |||||| | | || || |||| || || ||| | | ||| | || | Sbjct 14370 AGATAGAGTTCTCTTGGCCTTTTCAACCTCTCTCTTTAACCGAGAAACAGCTCTGGC--A 14313 Query 517963 TTGATTCAAATCTGTTT--TATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGA 518020 || | |||| | | | || || ||||||| || | | | || || | Sbjct 14312 TTCTTGGAAATATCAATACTGTACTTCTTCTTGAACAATTTGATGAAATGTCTTGTAACA 14253 Query 518021 CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAA 518080 |||| ||| ||||||||||| ||||| | ||||| |||| ||||| |||| ||| Sbjct 14252 CGATAATCGAAATCTTCACCACCCAAGTGAGTATCACCTGCAGTAGCAAGAACTTCGAAG 14193 Query 518081 AGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATA 518140 ||| | | | ||| | ||||| ||||| ||||| ||||| | |||| ||| Sbjct 14192 GCACCACCAGCGATAGAAAGAAGAGAAACATCGAAAGTTCCTCCACCTAAATCATAAACG 14133 Query 518141 AGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTT 518200 | | | ||||| | || | | ||||| | ||||| |||| || ||||||||| Sbjct 14132 ATGATCTG--TTTCTCT-TCCTCGCCCTTATCCAATCCATAGGCAATTGCGGCAGCAGTT 14076 Query 518201 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 518260 ||||| || | |||||| | |||||| | || |||||| | |||||||||||||| || Sbjct 14075 GGTTCGTTGACAATTCTGAGAACATTCAAGCCGGCAATTGTACCTGCATCTTTAGTTGCC 14016 Query 518261 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTA 518320 ||||| || | ||| ||||| |||||||| || |||| |||||||| ||| |||| || Sbjct 14015 TGTCTCTGGGCATCATTAAAGTATGCAGGGACGGTAACAACGGCATGAGTGACTTTCTTT 13956 Query 518321 CCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCT 518380 || | |||| | || |||| ||||| |||| ||||||| | || || ||||| Sbjct 13955 CCTAGATAATCTTCAGCAATTTGCTTCATCTTACCCAAAATCAAAGCAGAGATCTGTTCA 13896 Query 518381 GG---GGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCA 518437 || | |||||| ||| | ||||| || || | || |||| | | | ||| Sbjct 13895 GGAGTGTAATATT-CTT--TCTTATTTTCATCGGAAA--TCTGAATA-GCTGGACGACCC 13842 Query 518438 ACATT---AATAACTTTAAATGGCCAGTATTTCATATCTGAT--TGAACACTTTGGTCAT 518492 || | ||| || | || | | || |||| | ||| | | |||| Sbjct 13841 TTCTTGTCGACAACCTTGTAAGG--AAGACGTCTAATCTCCTTCTGAGTAGCCTTATCAT 13784 Query 518493 TAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAG 518552 | ||| | ||| ||||||| ||| |||| | | |||||| | | || || | Sbjct 13783 TGAAACGACGACCCATTAATCTCTTTATATCATAGACGGTATTGTTGGTGTTTGATGGGG 13724 Query 518553 CTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATG 518612 | || | || || | || |||| ||| |||| || | || | |||||||||| Sbjct 13723 CCTGGTTCTTAGCAGACTCACCAACAAGACGTTCACCTTCAGAGAAGGCGACATATGATG 13664 Query 518613 GAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACAC 518672 | || | || ||||||||||| || || | |||||||| | ||| || | |||| Sbjct 13663 GGGTAATCCGGTTACCTTGATCGTTGGCCAAGATTTCAACCCTTCCAGATTTCATAACAC 13604 Query 518673 CTACACAACTAAAAGTTGTTCCTAAATCAATACCAATA 518710 | |||||| |||| || || ||||||||||||||| Sbjct 13603 CAACACAAGAGTAAGTGGTACCCAAATCAATACCAATA 13566 Score = 87.8 bits (96), Expect = 1e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 322241 AAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCC 322300 || || || |||| || || ||||||||||| || | ||| | ||||||| || || Sbjct 14102 AATCCATAGGCAATTGCGGCAGCAGTTGGTTCGTTGACAATTCTGAGAACATTCAAGCCG 14043 Query 322301 GCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACA 322360 |||||| || | | ||| |||||| |||||||| || |||||||| ||||| || || Sbjct 14042 GCAATTGTACCTGCATCTTTAGTTGCCTGTCTCTGGGCATCATTAAAGTATGCAGGGACG 13983 Query 322361 GTAATAACTGC 322371 |||| ||| || Sbjct 13982 GTAACAACGGC 13972 >seq21 Length=245137 Score = 125 bits (138), Expect = 5e-23 Identities = 457/706 (65%), Gaps = 26/706 (4%) Strand=Plus/Minus Query 518024 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 518083 ||||| ||||||| ||| ||||| | ||||| || | || || | || ||| | Sbjct 108634 TTATCGAAATCTTGACCACCCAAGTGAGTATCACCGGCAGTTGCCTTAACAGTGAAGACA 108575 Query 518084 CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGT 518143 ||| | | || |||||||| ||||| || || ||||||| || || || | Sbjct 108574 CCACCCTTAATGTTCAAAAGAGAGACATCGAAAGTACCTCCACCCAAGTCGAAGATCAAA 108515 Query 518144 ACATTCATTTCTTTGTCTTGGTTTTT-----ATCAAGACCATACGCAAAAGCAGCAGCAG 518198 | | | | || || |||||| || | | | ||| || |||| |||||||| | Sbjct 108514 ATGTGCTTCTCCTT--CTTGGTCTTACCGGCACCCAAACCGTATGCAATGGCAGCAGCGG 108457 Query 518199 TTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGG 518258 | || || || |||||||||||||| || | ||| ||||| |||||||| ||||| | Sbjct 108456 TAGGCTCGTTGATAATTCTCAAAACGTTCATACCGGCAATGGCACCTGCATCCTTAGTAG 108397 Query 518259 CTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACT-TCT 518317 | ||||| || | ||| || || || || || |||||||| || | || | | | | Sbjct 108396 CCTGTCTCTGGGCATCATTGAAGTAAGCTGGCACAGTAATGACAG-ATTTTTCAATAGGT 108338 Query 518318 TTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGT 518377 | ||| || | || || || | ||||| || | |||| ||| |||||||||| | Sbjct 108337 TGACCGATCTTGGCCTCAGCAGTCTCCTTCATCTTGGTCAAAACCATAGATGAAATTTCT 108278 Query 518378 TCTGGGGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCA 518437 | || | | | ||| | ||| || || ||||| | | || || ||| Sbjct 108277 TGAGGAGCAAAAGTCTTAGTCTCACCCAAGTAGGAAACTTCGACCTTAGG---GTTGCCA 108221 Query 518438 ACATT---AATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTA 518494 || | ||| || || ||||| |||||||| ||| | | | |||||| | Sbjct 108220 TTGTTGTCGACAACCTTGAAAGGCCATGTCTTCATATCCTTTTGGATATCTGGGTCATCA 108161 Query 518495 AAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCT 518554 ||| | |||||| | || || ||||| || | ||| || ||| || | ||||| Sbjct 108160 AAACGACGACCAATCATACGCTTGGCATCGAAGACAGTGTTTTCTGGGTTCAAAGCAGCC 108101 Query 518555 TGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCT-CTGTAAATGAAACATATGATGG 518613 || | ||||| | |||||| | || || | ||| ||| |||| ||| || || || Sbjct 108100 TGGTTCTTGGCGGAATCTCCGACCA-ATCTCTCCTCTGGTGTGAATGCAACGTACGAAGG 108042 Query 518614 AGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACC----ATTTTGCCATA 518669 ||| || | ||||| || || || || || |||||||| ||| | ||| | || Sbjct 108041 AGTAGTTCTGTTACCCTGTTCGTTAGCGATGATTTCAAC---ACCGGCGGTCTTGTCGTA 107985 Query 518670 --CACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCA 518713 || | ||||| | || || || ||||| |||||||||||| Sbjct 107984 GGCAGCGACACATGAGTAGGTGGTACCCAAATCGATACCAATAGCA 107939 >seq53 Length=197219 Score = 98.7 bits (108), Expect = 8e-15 Identities = 143/201 (71%), Gaps = 1/201 (0%) Strand=Plus/Plus Query 668849 TTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCT 668908 ||||| ||||||||||| || |||||||||| |||||||| || ||||| ||| | || Sbjct 171238 TTAAG-GGTAAAGAAGGCCGACTTAGAGGAAACTTGATGGGTAAGCGTGTTGATTTCTCA 171296 Query 668909 GCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTT 668968 |||||| | || ||| | |||||| ||||||| | || | ||||||||||| | Sbjct 171297 GCACGTTCCGTCATTTCCGGTGATCCTAATATTGAATTAGATCAGGTTGGTGTTCCAATG 171356 Query 668969 ATTATTGCTAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGAGTATTTG 669028 | | || |||| | || | | |||||||| || ||||||| ||| | ||| Sbjct 171357 ACCGTCGCAAAAACATTGACATATCCAGAAATTGTGACGCCTTATAATATCGAGAAGTTG 171416 Query 669029 ACTCAATTAGTGAAAAATGGT 669049 || | | | || | ||||||| Sbjct 171417 ACCCGACTCGTTAGAAATGGT 171437 >seq171 Length=13790 Score = 95.1 bits (104), Expect = 9e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 367000 GCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCATTAT 367059 || ||||| |||||||||||||| ||| |||||||||||||| | |||| |||||| | Sbjct 7885 GCAACAATTGCATTTGGTATGGGAATTGATAAACCGGATGTTCGGTTTGTGATTCATCTT 7826 Query 367060 GGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGATGGA 367119 || ||| |||||||||||||||| |||| |||| | |||||| | ||||| Sbjct 7825 ACTTTACCGCGAAATCTTGAAGGTTATTATCAGGAAACTGGTCGTGCAGGTAGGGATGGT 7766 Query 367120 GAAAAATCTTATTGT 367134 || |||| | ||| Sbjct 7765 AAACCATCTGACTGT 7751 >seq115 Length=359903 Score = 95.1 bits (104), Expect = 9e-14 Identities = 100/129 (78%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACC-AGC 518235 || ||||| | || |||| ||||| ||||||||||| |||| ||||| || || | | Sbjct 328778 CCGTACGCTAGAGATGCAGAGGTTGGCTCATTAATAATCCTCACCACATTCAGGCCAACC 328837 Query 518236 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 518295 ||||| |||||| ||| || || ||||| |||||||| || |||||||| || ||||| Sbjct 328838 AATTC-TCCTGCCGTTTTCGTTGCCTGTCTCTGTGAATCATTGAAATATGCGGGCACAGT 328896 Query 518296 AATAACGGC 518304 ||| || || Sbjct 328897 AATCACAGC 328905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780813517430374