Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq115 266 4e-66
seq116 87.8 2e-12
>seq115
Length=359903
Score = 266 bits (294), Expect = 4e-66
Identities = 1113/1729 (64%), Gaps = 47/1729 (3%)
Strand=Plus/Plus
Query 111627 ATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACATACGAC 111686
||||| || || | ||||||||||| |||||| | ||| | ||| | ||| ||
Sbjct 5091 ATGCGTGTTGCCGTTGGTATCCATGGTAGTGATATTCCTAAAGTTCTTGAGTCTTACAAC 5150
Query 111687 AAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCA 111746
||||| || |||| || || |||||||| | ||||| || ||||| ||
Sbjct 5151 CTCATGTCTAAACGTTACTTCACGCATGCTTCACCAACCTTGTTCAATGCAGGTACTCCT 5210
Query 111747 AGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATT 111806
||||| || ||||| |||||| | |||| | || || || || ||| | || ||
Sbjct 5211 AGACCTCAGATGTCTTCATGTTTCTTGGTTGCCATGAAAGATGACTCCATCGAAGGTATC 5270
Query 111807 TACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCAC 111866
|||| ||| | | | || || ||| || || || ||||||||||| |||||
Sbjct 5271 TACGATACTTTGAAGCAGTGCGCTTTAATTTCTAAAACCGCCGGTGGTATCGGTATGCAT 5330
Query 111867 ATCCATGATGTCAGAGCCAACAAGTCTCGT--ATTAGAGGTACAAATGGTCAATCAGATG 111924
|||||| | | | || | | ||| | ||| |||||| |||||| || |||
Sbjct 5331 ATCCATAACATTCGTGCTA--CTGGCTCATACATTGCAGGTACCAATGGTACTTCTAATG 5388
Query 111925 GTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGG-- 111982
|||| ||||| ||| |||| || || ||| || || | ||||| | |||| |||
Sbjct 5389 GTATCATTCCTATGATTCGTGTCTTCAACAGTACTGCCAGATATGTCGATCAAGGTGGTA 5448
Query 111983 ----GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGG 112038
||||| || | || || |||||| | || || ||||| || |||||| | |
Sbjct 5449 ACAAGCGTC---CTGGTGCCATTGCCGTCTATTTGGAACCTTGGCATGCAGATATCTTCG 5505
Query 112039 AGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCT 112098
| ||| | || | || | ||||| ||| | || ||| | ||| ||| | |||
Sbjct 5506 ATTTCATCGATATCCGGATGAACCATGGTAAGGAAGAGATTAGAGCCCGTGATTTGTTCC 5565
Query 112099 CCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTC 112158
| ||||| |||||||| ||||| ||||||||| | || || || | ||| ||| ||
Sbjct 5566 CAGCTCTTTGGATTCCTGATCTTTTCATGAAGCGTGTGGAAGAAAATGGTCCATGGACTT 5625
Query 112159 TCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCC 112218
| || | || | || || || || ||||||| | ||||| ||||| |||
Sbjct 5626 TGTTCTCACCTTCTGAAGCTCCTGGCCTTTCCGATGTCTACGGTGATGAGTTCGAAAAAT 5685
Query 112219 TCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATG-TG 112277
| ||||| || || || | ||| |||| | | || || | || | | | |
Sbjct 5686 TGTACACCAAATATGAAAAGGAAGGTCGTGGTAGAAGAACTGT-CAAGGCACAAAAGCTT 5744
Query 112278 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGAC 112337
||| | ||| | || | ||||| || |||||||| |||| ||| | ||||||||
Sbjct 5745 TGGTATCAGATTTTGGAGGCCCAAACTGAAACTGGTACTCCATTCATGATCTACAAAGAT 5804
Query 112338 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGT 112397
|| |||||| ||||||||||||||||||| | ||| || ||| |||||| | ||
Sbjct 5805 GCTTGTAACAGAAAGAGTAATCAAAAGAATCTCGGTACTATTAAGTCATCCAACTTATGC 5864
Query 112398 ACAGAAATCTTGGAAT-TTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAAT 112456
|| | | |||| | | || || | || || ||| ||||| | || |||
Sbjct 5865 TGTGAGGTTGTTGAATACTCCTCACCAAAAGAAGTTGG-TGTCTGTAATTTGGC--TAAT 5921
Query 112457 CGCTCTCCCCAAGTAT--GTGGATCCAGA-GACAAA--GAC---ATTTGATTATGAAAAA 112508
|| || | || || || || |||| || ||| | | || | | ||| |||
Sbjct 5922 ATCTGTCTTCCAGCATTCGTTGAATCAGATGAGAAATCGTCTTGGTTCAACTTTGAGAAA 5981
Query 112509 CTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTT 112568
| || || | || || ||| || ||| | ||||||||||| || || || |
Sbjct 5982 TTACATCAAATCACTAAGGTTGTTACTCGTAACTTGAACAGAGTTATAGACAGGAACTAC 6041
Query 112569 TACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGT 112627
|| || ||| ||| || ||||| || ||||||||| | | || |||| | ||||| |
Sbjct 6042 TATCCAGTTCCAGA-GGCCCGTAATTCGAATATGAGAAATAGACCTATTGCTATCGGTAT 6100
Query 112628 CCAAGGTCTCGCGGA---TGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGC 112684
||||||||| || || | | ||||| ||| ||| | || || ||| |||||
Sbjct 6101 CCAAGGTCTTGCAGATACTTTCTTCATGCTTCGTCTAC-CGTTCGAGAGTCC--AGAAGC 6157
Query 112685 GAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTC 112744
||| | ||| | || |||||||| | || || || || | || | ||
Sbjct 6158 TCGTGAATTGAATATTCAGATCTTTGAGACTTTATACCATGCTGCATTGGAAGAATCTTG 6217
Query 112745 GGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGG 112804
| | || | | || ||| | ||| ||| | || || || ||||| || ||||
Sbjct 6218 TCAACTAGCTGCCGAGGAAGGTACCTATTCAACATACGAAGGATCGCCAGCATCTAAAGG 6277
Query 112805 GGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACGACTGGGACGCTC 112863
| ||||||| |||||||| |||| || ||||| | || | |||||||| |
Sbjct 6278 TATCCTTCAATATGATATGT-GGAATAAGAAACCAACCGATCTTTGGGACTGGGATGACT 6336
Query 112864 TCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAA 112923
| |||| | || |||| || | | || | || |||||||||||||||
Sbjct 6337 TAAAGGCTCAAGTCGCCAAGAAAGGATTGAGGAATTCGTTGTTATTGGCACCAATGCCAA 6396
Query 112924 CAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACA 112983
| || || || | || || ||||| | || ||||| || || || | ||| | ||||
Sbjct 6397 CTGCATCTACATCTCAGATTATGGGTTACAACGAATGTTTCGAGCCATTCACATCCAACA 6456
Query 112984 TCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATG 113043
|||||| |||||| | || || ||||| |||||| || || | || | |
Sbjct 6457 TCTATCAAAGAAGAGTTTTGGCCGGTGAGTTCCAGATTGTTAATCCTTATATGTTGAAGG 6516
Query 113044 ACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTG 113103
|| ||| || || ||| ||||| || | |||||||| | || | || | ||
Sbjct 6517 ACTTCATCGATATGGGTATCTGGAGTAATGCAATGAAGGACTTTATCATTAAGGATAATG 6576
Query 113104 GTTCCATTCAAAATATTGTGGATATTCCAGATGAAATT-AAGAAGTTGTACCGCACAGTT 113162
|||| || || || | || | ||||| |||||| ||||| ||||| || || |||
Sbjct 6577 GTTCTATCCAGAACTTACCAAATGTGCCAGA-GAAATTCAAGAAATTGTATCGTACCGTT 6635
Query 113163 TGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGAT 113222
||||| ||| ||| ||||||||| ||||| || || | ||| | ||| |
Sbjct 6636 TGGGAGATCTCACAGAAATCTGTCATTGATATGGCTGCCGACAGAGGTGCATACATCTGT 6695
Query 113223 CAAAGTCAAAGT--ATGAATCTATTCA--TGGAAAGTCCAACGATGTCCAAGCTCTCTTC 113278
||| ||| ||| ||||| |||||| || || ||||| ||| ||| | ||||
Sbjct 6696 CAA--TCACAGTCCATGAA--TATTCATTTGCAATCCCCAACTATGGGTAAGTTGACTTC 6751
Query 113279 TATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTAC 113327
|||||| | || | |||||||||||||| || || || ||||| |||
Sbjct 6752 CATGCACTTCTATGGATGGAAGAAGGGTCTTAAGACTGGTATGTACTAC 6800
>seq116
Length=77448
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/226 (70%), Gaps = 4/226 (2%)
Strand=Plus/Minus
Query 16065 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGC-GACTTCAAAGAG 16123
|||||||| |||||||| || ||||| ||||| |||||| || || | ||| ||| |
Sbjct 73820 GCATCAATTTCATCAATAAACACGATCGATGGTGCATTTTCACGGGCAGTCTT-AAATAA 73762
Query 16124 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACA 16183
|| || ||||| || || ||||| |||||||| || || || | | ||||| |
Sbjct 73761 TTCACGAACACGGGATGCACCGACACCGACAAACATTTCAACGAATTCGGAACCGGAA-A 73703
Query 16184 TTGGAT-GAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 16242
| || ||| || ||| | | ||| ||| | ||| ||| || | ||||||||| |
Sbjct 73702 CAGAATAGAATGGAACACCGGCCTGACCGGCAGTAGCTTTGGCAAGCAAAGTCTTACCGG 73643
Query 16243 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288
|||| || ||| | | || ||||| || ||||||||||| ||
Sbjct 73642 TACCAGGTGGACCAGACAAGATAGCACCACGAGGAATCTTGGCACC 73597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620741011088880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |