Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq115 268 1e-66
seq116 84.2 3e-11
>seq115
Length=359903
Score = 268 bits (296), Expect = 1e-66
Identities = 1114/1730 (64%), Gaps = 51/1730 (3%)
Strand=Plus/Minus
Query 105596 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTG 105655
|||||||| || ||||| || || | ||||| | || | ||||| |||| | |||
Sbjct 6799 TAGTACATACCAGTCTTAAGACCCTTCTTCCATCCATAGAAGTGCATGGAAGTCAACTTA 6740
Query 105656 GACATCGTTGGACTTTCCATGAAAAGATTCAT--ACTTTGACTCTGGTCA-ATGAAGCGA 105712
||| ||||| || || || |||||| ||| ||| | | || ||| | |
Sbjct 6739 CCCATAGTTGGGGATTGCAAATGAATATTCATGGACTGTGATT---GACAGATGTATGCA 6683
Query 105713 CCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGATTTCCCACACTGTGCGGTAG 105772
|| | | || ||||||||||||||| ||| ||| ||||| || || || ||
Sbjct 6682 CCTCTGTCGGCAGCCATATCAATGACAGATTTCTGTGAGATCTCCCAAACGGTACGATAC 6623
Query 105773 AGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCTTGACC 105832
| ||||||| | ||||| | || || | || || || ||||| |||| |
Sbjct 6622 AATTTCTTGAATTTCTCTGGCACATTTGGTAAGTTCTGGATAGAACCATTATCCTTAATG 6563
Query 105833 ATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGC 105892
|| | |||||||| | || ||| | ||| || | ||| || || | | ||
Sbjct 6562 ATAAAGTCCTTCATTGCATTACTCCAGATACCCATATCGATGAAGTCCTTCAACATATAA 6503
Query 105893 TTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAG 105952
|| |||||| ||||| || || | |||||| |||||||||| | ||| |
Sbjct 6502 GGATTAACAATCTGGAACTCACCGGCCAAAACTCTTCTTTGATAGATGTTGGATGTGAAT 6443
Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012
|| || || ||||| || | ||||| || || | || || || |||||||||||||||
Sbjct 6442 GGCTCGAAACATTCGTTGTAACCCATAATCTGAGATGTAGATGCAGTTGGCATTGGTGCC 6383
Query 106013 ATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTT---CCTTGAGAACATCCCAG 106069
| || | || | | | ||||| |||| | || |||| | ||||||||
Sbjct 6382 AATAACAACGAATTCCTCA-ATCCTTT--CTTGGCGACTTGAGCCTTTAAGTCATCCCAG 6326
Query 106070 TCGTAGTTGAGC--TTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACG 106127
|| | || | |||||||| |||| |||||||| ||||||| | |||| || |
Sbjct 6325 TCCCAAA-GATCGGTTGGTTTCTTATTCC-ACATATCATATTGAAGGATACCTTTAGATG 6268
Query 106128 TGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCT 106187
|| || || || |||| ||||| ||||| | |||| | || ||| | |
Sbjct 6267 CTGGCGATCCTTCGTATGTTGAATAGGTACCTTCCTCGGCAGCTAGTTGACAAGATTCTT 6208
Query 106188 CCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTG 106247
||| | || || || | || |||||||| || ||||| || ||||| ||
Sbjct 6207 CCAATGCAGCATGGTATAAAGTCTCAAAGATCTGAATATTCAATTCACGAGCTTC---TG 6151
Query 106248 AA---TCAAATGCGTAG-CG--GCACAAAATAAATACATCCGCGAGACCTTGAACACCCA 106301
| || || | |||| || ||| || || || || || |||||||| | ||| |
Sbjct 6150 GACTCTCGAACG-GTAGACGAAGCATGAAGAAAGTA--TCTGCAAGACCTTGGATACCGA 6094
Query 106302 AACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC-AACGGGATAAAAATTT 106360
| |||||||||| | || |||||| || || || || ||| ||| ||||| | ||
Sbjct 6093 TAGCAATAGGTCTATTTCTCATATTCGAATTACGGGCC-TCTGGAACTGGATAGTAGTTC 6035
Query 106361 CTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCA 106420
||||| || |||| ||| | || ||||||| ||| ||||||| ||| | ||| |||
Sbjct 6034 CTGTCTATAACTCTGTTCAAGTTACGAGTAACAACCTTAGTGATTTGATGTAATTTCTCA 5975
Query 106421 TAATCAAA--AGTGCGAGT-CTCTTC--ATTGACATACTT-TGGAAGGGCGATTGATGCC 106474
| | || | ||| | ||| || ||| | | | |||||| ||| |||
Sbjct 5974 AAGTTGAACCAAGACGATTTCTCATCTGATTCAACGAATGCTGGAAGACAGATATTAGCC 5915
Query 106475 AAATTGCAAACAGC--CGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGT 106532
||||| || ||| | | ||| | | | | ||| || | || || || ||||
Sbjct 5914 AAATTACAGACACCAACTTCTTTTGGTGAG--GAGTATTCAACAACCTCACAGCATAAGT 5857
Query 106533 TGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGT 106592
|||| |||||| || || | ||||||||| ||||||||| |||| || ||||| ||||
Sbjct 5856 TGGATGACTTAATAGTACCGAGATTCTTTTGATTACTCTTTCTGTTACAAGCATCTTTGT 5797
Query 106593 AGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCG 106651
||| |||| | || || || || || || || | || | ||| | ||| | | |
Sbjct 5796 AGATCATGAATGGAGTACCAGTTTCAGTTTGGGCCTCCAAAATCTGATACCAAAGCTTTT 5737
Query 106652 GCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCA 106711
| | || | ||| | | | || || ||| || || || ||||| | |||
Sbjct 5736 GTGCCTTG-ACAGTTCTTCTACCACGACCTTCCTTTTCATATTTGGTGTACAATTTTTCG 5678
Query 106712 AACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCAT 106771
||||| ||||| | ||||| || || || || | || |||| | || ||||
Sbjct 5677 AACTCATCACCGTAGACATCGGAAAGGCCAGGAGCTTCAGAAGGTGAGAACAAAGTCCAT 5618
Query 106772 TGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGA 106831
||||| || || || |||||||||||||| || |||||||| || | || || | |
Sbjct 5617 GGACCATTTTCTTCCACACGCTTCATGAAAAGATCAGGAATCCAAAGAGCTGGGAACAAA 5558
Query 106832 TCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATA 106891
|| | | | |||||| | ||| ||||| | || | || | ||| || | ||||
Sbjct 5557 TCACGGGCTCTAATCTCTTCCTTACCATGGTTCATCCGGATATCGATGAAATCGAAGATA 5498
Query 106892 TCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCT 106945
|| || ||||| || || | |||||| || || | || ||||| ||| ||
Sbjct 5497 TCTGCATGCCAAGGTTCCAAATAGACGGCAATGGCACC---AGGACGCTTGTTACCACCT 5441
Query 106946 TGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGAT 107005
|||| ||||| | || || ||| || || |||| ||| ||||| ||||||| ||
Sbjct 5440 TGATCGACATATCTGGCAGTACTGTTGAAGACACGAATCATAGGAATGATACCATTAGAA 5381
Query 107006 TGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCA 107065
|||||| || || ||| || | | || | | | |||||| ||||| ||
Sbjct 5380 GTACCATTGGTACCTGCAATGTATGAGCCAGTAGCACGAATGTTATGGATATGCATACCG 5321
Query 107066 ATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTG 107125
||||| || || || || ||| || |||| | | | ||| | |||||||| | |
Sbjct 5320 ATACCACCGGCGGTTTTAGAAATTAAAGCGCACTGCTTCAAAGTATCGTAGATACCTTCG 5261
Query 107126 ATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCA 107185
|| ||||| || || |||| | | ||| || |||||||| ||||| || |||||
Sbjct 5260 ATGGAGTCATCTTTCATGGCAACCAAGAAACATGAAGACATCTGAGGTCTAGGAGTACCT 5201
Query 107186 GCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTC 107245
|||||||| | |||||||| || || |||| || || ||||| || ||| | |
Sbjct 5200 GCATTGAACAAGGTTGGTGAAGCATGCGTGAAGTAACGTTTAGACATGAGGTTGTAAGAC 5141
Query 107246 TCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCAT 107295
|| | || | ||| || || ||||| || | ||| ||||||||
Sbjct 5140 TCAAGAACTTTAGGAATATCACTACCATGGATACCAACGGCAACACGCAT 5091
>seq116
Length=77448
Score = 84.2 bits (92), Expect = 3e-11
Identities = 155/225 (69%), Gaps = 2/225 (1%)
Strand=Plus/Minus
Query 9372 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 9431
|||||||| |||||||| || || || ||||| |||||| ||||| | | ||| |
Sbjct 73820 GCATCAATTTCATCAATAAACACGATCGATGGTGCATTTTCACGGGCAGTCTTAAATAAT 73761
Query 9432 TCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACAT 9491
|| ||||| | || || ||||| |||||||| || || || | | ||||| |
Sbjct 73760 TCACGAACACGGGATGCACCGACACCGACAAACATTTCAACGAATTCGGAACCGGAA-AC 73702
Query 9492 TGGAT-GAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 9550
| || ||| || ||| | | ||| ||| | ||| ||| || | ||||||||| ||
Sbjct 73701 AGAATAGAATGGAACACCGGCCTGACCGGCAGTAGCTTTGGCAAGCAAAGTCTTACCGGT 73642
Query 9551 ACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595
||| || ||| | | || ||||| || ||||||||||| ||
Sbjct 73641 ACCAGGTGGACCAGACAAGATAGCACCACGAGGAATCTTGGCACC 73597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589979479917960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |