Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq117 116 4e-21 >seq117 Length=74469 Score = 116 bits (128), Expect = 4e-21 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 153207 ATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTGAG 153266 || ||| |||| ||||||||||||| | ||| | || || || || |||||| | ||| Sbjct 17304 ATCGGTAAAGGTTACTATGGAACCAAGATGCCCGCCGTGATTCAACGTAACGTTATGGAG 17245 Query 153267 AATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTG 153326 ||||| |||||||| || || || || ||||| || || | || ||||| |||||| Sbjct 17244 AATCCAGCCTGGTACACTTCGTATACGCCATATCAGGCCGAAGTGTCCCAGGGTAGATTG 17185 Query 153327 GAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAAAC 153386 ||||| || | || | |||||| | |||| || | || || | || | || || Sbjct 17184 GAAGCCTTGCTTAACTTCCAAACCGTGATCAGTGACTTGACGGGTCTGCCTGTCGCCAAT 17125 Query 153387 GCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428 || || ||||| ||||||| ||||| || || ||||| ||| Sbjct 17124 GCCTCGCTATTGGATGAAGGTACTGCCGCTGCTGAAGCTATG 17083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579211504011360