Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq117 122 1e-22
>seq117
Length=74469
Score = 122 bits (134), Expect = 1e-22
Identities = 160/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 157882 ATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTGAG 157941
|| ||| |||| ||||||||||||| | ||| | || || || || |||||| | |||
Sbjct 17304 ATCGGTAAAGGTTACTATGGAACCAAGATGCCCGCCGTGATTCAACGTAACGTTATGGAG 17245
Query 157942 AATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTG 158001
||||| |||||||| || || || || ||||| || || | || ||||| ||||||
Sbjct 17244 AATCCAGCCTGGTACACTTCGTATACGCCATATCAGGCCGAAGTGTCCCAGGGTAGATTG 17185
Query 158002 GAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAAC 158061
||||| || | || | |||||| | |||| || | || || || || | || ||
Sbjct 17184 GAAGCCTTGCTTAACTTCCAAACCGTGATCAGTGACTTGACGGGTCTGCCTGTCGCCAAT 17125
Query 158062 GCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103
|| || ||||| ||||||| ||||| || || ||||| |||
Sbjct 17124 GCCTCGCTATTGGATGAAGGTACTGCCGCTGCTGAAGCTATG 17083
Score = 104 bits (114), Expect = 3e-17
Identities = 271/406 (67%), Gaps = 18/406 (4%)
Strand=Plus/Minus
Query 159383 AAAGAAATGTATGTT-TGATACCAGAGTCAG--CACATGGAACTAATCCTGCATCAGCAG 159439
|||||||| | |||| | || |||| |||| ||||||| || |||||||| || ||
Sbjct 15764 AAAGAAATAT-TGTTCTAATTCCAG--TCAGTGCACATGGTACCAATCCTGCCTCTGCTA 15708
Query 159440 TGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCA 159499
||||| || | |||||||| || || ||| ||| | || | | ||||| |
Sbjct 15707 CTATGGCTGGTTTCAAAGTTGTTCCAGTTAAATGTCTTGAGAACGGAAGTTTGGACATGA 15648
Query 159500 AAGATCTAGAGAA-----GAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGAT 159554
||||| | ||| | ||| ||| ||| | | | || || | |||||
Sbjct 15647 AAGATATGGAGTCTCAGTGTAAGAAAT-----ATAAAGATAATCTTGCAGCCTTCATGAT 15593
Query 159555 TACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGA-CAGATATGTAAGATTG 159613
|||||||||| | || || | || ||| || |||||| | | ||| | ||
Sbjct 15592 TACATATCCAACAACTTTCGGACTTTTCGAACCAGGTATCAGAACTGCTATCGAC-ATGA 15534
Query 159614 TTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTC 159673
| ||| | |||||||||| || ||| | |||||||| || | |||||||| || ||||
Sbjct 15533 TCCATAAATATGGTGGTCAAGTTTATATGGATGGTGCTAACATGAATGCACAAGTCGGTC 15474
Query 159674 TAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCT 159733
| | ||| ||| |||||| || || |||||| | ||| | || ||||||||||
Sbjct 15473 TTACTTCACCGGCTGATCTTGGTGCGGACGTTTGTCATTTGAACCTTCACAAGACATTCT 15414
Query 159734 GTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779
| ||||| || || ||||| || || || || || || || ||||
Sbjct 15413 GCATTCCTCACGGTGGTGGTGGACCCGGTGTTGGACCAATCTGTGT 15368
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588049884235440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |