Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq126 370 9e-97 seq140 255 5e-62 seq127 134 1e-25 seq110 127 2e-23 seq1 95.1 1e-13 >seq126 Length=356038 Score = 370 bits (410), Expect = 9e-97 Identities = 499/690 (72%), Gaps = 16/690 (2%) Strand=Plus/Plus Query 551908 TAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTG 551967 |||||||||||||||| |||||||| || ||||||| ||| | |||| ||| | ||| Sbjct 228927 TAAGAACTGCTTGCGAGAGAGCCAAGAGAACTCTTTCGTCTTCTGCTCAGACCTCGGTTG 228986 Query 551968 AAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTG 552027 || | ||||| | | ||| |||||||||| |||| |||| || | || | ||||| Sbjct 228987 AAATTGATTCCCTTTATGAAGGAATTGATTTCTATACTTCTATCACGCGTGCAAGATTTG 229046 Query 552028 AAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAG 552087 | || |||| ||||| | |||||| ||| | || |||||||| ||||||| |||| Sbjct 229047 AGGAACTTTGCGCTGATTTGTTTAGATCAACTTTGGATCCAGTAGAGAAAGTTTTGAGAG 229106 Query 552088 ATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAA 552147 |||| || | || || ||| |||| | |||||||| || |||||||| ||||| |||| Sbjct 229107 ATTCTAAACTGGACAAGTCCCAAGTTGACGAAATTGTTCTGGTTGGTGGTTCTACGAGAA 229166 Query 552148 TTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTC---AATGGTAAAAAATTAAATGAAA 552204 |||| ||| ||| || || | |||| | ||| |||||||| | || || || Sbjct 229167 TTCCAAAAGTTCAGAAATTGGT---TTCTGAATTCTTCAATGGTAAGGAGTTGAACAAAT 229223 Query 552205 GTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG 552264 | | ||||| |||||||| |||||||| ||||| || | || |||||||| | | | Sbjct 229224 CTATCAATCCTGATGAGGCAGTTGCCTACGGTGCAGCCGTCCAGGCAGCTATATTGACCG 229283 Query 552265 GACAA-ACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTT 552323 | | | | | ||| ||| || || | | ||| ||||||| ||||| | |||||| Sbjct 229284 GTGACGATTCTTCAAAGACT-CAGGATTTATTGCTTTTAGATGTCACTCCGTTGTCTCTT 229342 Query 552324 GGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCT 552383 ||| | ||||| | || ||| ||||||| || | || | |||||| |||| |||||| Sbjct 229343 GGTATTGAAACCGCAGGTGGTGTTATGACCAAGTTGATTAAGAGAAATTCTACAATTCCT 229402 Query 552384 TGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAA 552443 || ||||||||| | || ||||| ||| | ||||| ||| | | ||| ||||| Sbjct 229403 TGCAAAAAATCTGAGATCTTCTCTACTTATGCTGATAACCAACCGGGCGTTTTGATTCAG 229462 Query 552444 ATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTG----GTACTTTTAA 552499 | |||||||| ||||||| || |||||||| ||||||| ||| ||| | Sbjct 229463 GTGTTTGAAGGTGAAAGAACGAAGACCAAAGATAA----CAACTTGTTAGGTAAATTTGA 229518 Query 552500 TTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATAT 552559 || ||||||||||| || || | || || || ||||||||||||||||||||||| Sbjct 229519 GTTGACTGGTATTCCTCCAGCACCAAGAGGTGTTCCACAAATTGAAGTTACTTTCGATAT 229578 Query 552560 CGATGCCAATGGAATTTTGAATGTGACTGC 552589 |||||||||||| || |||||||| |||| Sbjct 229579 CGATGCCAATGGTATATTGAATGTCTCTGC 229608 Score = 179 bits (198), Expect = 3e-39 Identities = 370/543 (68%), Gaps = 12/543 (2%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTG--TTTGGCAAAATGGTA 550049 || || || || ||||| || || || || |||||||| |||| ||| || | Sbjct 228149 GCAATTGGAATTGATTTGGGTACTACGTACTCATGTGTTGGACACTTTGCCAA--TGACA 228206 Query 550050 AAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCA 550109 ||| || |||||||| ||||||||||||||||| || || |||||||||||| | |||| Sbjct 228207 GAGTGGATATTATTGCAAATGATCAAGGTAACAGGACGACACCATCTTATGTTGCCTTCA 228266 Query 550110 CGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCA 550169 | || || || || | ||||| || ||||| | || || || |||||||| | Sbjct 228267 CAGACACCGAGAGGTTGATCGGTGAGGCCGCAAAGAACCAGGCTGCTATGAATCCTACAA 228326 Query 550170 ATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGA--CTGTTCA 550227 | || | || ||||| || | | || || |||| | || || ||| ||||| Sbjct 228327 ACACCGTCTTCGATGCCAAGAGACTTATCGGTAGAAAATACAACGA--CGATGAGGTTCA 228384 Query 550228 GGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGA 550287 ||||||||| ||||||||||| | || | |||||| |||||| || | || | Sbjct 228385 AAATGATATGAAGAATTGGCCTTTCAAGGTTATCAATGTTGGTGGAAAGCCAAAGGTTCA 228444 Query 550288 AGCT-ACTCATGAAGGATCTGTTAAACAATTT-TCACCAGAACAAATTTCATCTATGGTT 550345 | | | | | |||| | | || | ||| | ||||| | || || || |||||| Sbjct 228445 GGTTGAAT--TCAAGGGTGAGACCAAGAGTTTCACTCCAGAGGAGATATCTTCCATGGTT 228502 Query 550346 TTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTA 550405 |||| |||||||| |||| || || ||| | ||| | |||| | ||||| || Sbjct 228503 TTAACCAAAATGAAGGAAACCGCTGAAGCATTTTTAGGTGATAAAGTGAAAGATGCCGTT 228562 Query 550406 ATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGT 550465 | || || ||||| || || || || || || | || || || || ||||| || Sbjct 228563 GTCACCGTTCCAGCTTACTTCAACGATTCGCAGAGACAGGCAACCAAGGATGCAGGTACA 228622 Query 550466 ATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATAT 550525 ||||| ||||| ||||| | | ||||||||||| |||||||| ||||| |||| || Sbjct 228623 ATTGCCGGACTGAATGTGATGAGAATTATCAATGAGCCTACTGCAGCTGCCATTGCTTAC 228682 Query 550526 GGA 550528 ||| Sbjct 228683 GGA 228685 >seq140 Length=46691 Score = 255 bits (282), Expect = 5e-62 Identities = 474/687 (69%), Gaps = 14/687 (2%) Strand=Plus/Minus Query 551910 AGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAA 551969 |||||||| ||||| ||||| || || ||||||| ||| | | |||||| | |||| Sbjct 13895 AGAACTGCATGCGAGAGAGCTAAGAGAACTCTTTCCTCTTCTGCACAAACCTCAGTTGAG 13836 Query 551970 GTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAA 552029 | ||||| || | || || ||||| | | || |||| | || |||| ||| ||| Sbjct 13835 ATCGATTCTTTGTACGAAGGTATTGACTTCTACACTTCTATCACCAGAGCCAGATTCGAA 13776 Query 552030 GATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGAT 552089 || | ||||| ||||| || ||| || | || || || | | ||||| | |||| Sbjct 13775 GAGCTCTGTTCCGATCTGTTCAGATCCACTTTGGACCCTGTTCAGAAGGTTTTGAAAGAT 13716 Query 552090 TCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATT 552149 | ||| | || || || || | | || || || | || ||||| ||||| |||||| Sbjct 13715 GCCAAGTTGGACAAGTCTCAAATTGACGAGATCGTTTTGGTCGGTGGTTCTACCAGAATT 13656 Query 552150 CCTAAAATTCGCGAAATGTTAAGTTCTTATTTC---AATGGTAAAAAATTAAATGAAAGT 552206 || || ||| ||| ||| |||| | ||| || ||||| | ||| |||| Sbjct 13655 CCAAAGGTTC---AAAAGTTGGTTTCTGACTTCTTCAACGGTAAGCAGCCAAAC--AAGT 13601 Query 552207 G--TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG 552264 | || || |||||||||||||| |||||||| || |||| || || |||||||||| Sbjct 13600 CCATCAACCCTGATGAGGCTGTTGCTTATGGTGCTGCCGTTCAGGCCGCCATTCTTTCTG 13541 Query 552265 GACAA-ACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTT 552323 | | | | | ||||||| ||| | | | ||| | |||||||| || | |||||| Sbjct 13540 GTGACGAGTCTTCAAAAACT-CAAGACTTGTTGCTTTTGGATGTTACCCCATTGTCTCTT 13482 Query 552324 GGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCT 552383 ||| | ||||| | || ||| | ||||| || | ||| |||||| | |||||||| Sbjct 13481 GGTATTGAAACTGCCGGTGGTGTGATGACCAAGTTGATCCCAAGAAATTCGACTATTCCA 13422 Query 552384 TGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAA 552443 ||||| || ||| | || ||||| || | || || || | | ||| ||||| Sbjct 13421 TGTAAGAAGTCTGAGATCTTCTCTACCTACGCCGACAACCAGCCAGGTGTGTTGATTCAG 13362 Query 552444 ATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGG-TACTTTTAATTT 552502 | || ||||| ||||||| ||||| ||||| || || |||| || ||| | || Sbjct 13361 GTGTTCGAAGGTGAAAGAACTAAGACTAAGGATAACAA-CATGTTGGGTAAGTTTGAATT 13303 Query 552503 AGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGA 552562 |||||||| || || || | || || || |||||||||||||| |||||||| || Sbjct 13302 GTCTGGTATTCCACCAGCACCAAGAGGTGTTCCACAAATTGAAGTTACCTTCGATATTGA 13243 Query 552563 TGCCAATGGAATTTTGAATGTGACTGC 552589 ||||||||| |||||||| ||| |||| Sbjct 13242 TGCCAATGGTATTTTGAACGTGTCTGC 13216 Score = 194 bits (214), Expect = 1e-43 Identities = 373/540 (69%), Gaps = 20/540 (4%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTG--TTTGGCAAAATGGTAAAGTTG 550055 || || ||||| || || || || ||||||||| |||| ||| || | ||||| Sbjct 14663 GGAATTGATTTGGGTACTACGTACTCATGTGTTGGTCACTTTGCCAA--TGACAGAGTTG 14606 Query 550056 AAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAA 550115 | |||||||||||||| |||||||||||||| || || || |||||| | || || || | Sbjct 14605 ACATTATTGCCAATGACCAAGGTAACAGAACCACCCCTTCATATGTTGCATTTACCGATA 14546 Query 550116 CTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACT 550174 | || | ||| | ||||||| || || || |||| || || || || ||||| ||| Sbjct 14545 CCGAGAGATTGA-TTGGTGAGGCTGCCAAGAATCAGGCTGCTATGAACCCAACCAACACT 14487 Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACT--GTTCAGGCAG 550232 | || |||||||| | | ||||| | | | ||| ||| || ||| | Sbjct 14486 GTCTTCGATGCTAAGAGACTTATTGGTCGTAAATACGCTGA--CGAAGAAGTCCAGAGTG 14429 Query 550233 ATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTA 550292 |||||||||| ||||||||| | ||||| ||||| |||||| || | ||||| | | Sbjct 14428 ATATGAAGCACTGGCCTTTCAAGGTTGTTGATGTTGGTGGAAAGCCAAAGATTGAGGTTC 14369 Query 550293 CTCATGAAGGATCTGTTAAACAAT---TTTCAC--CAGAACAAATTTCATCTATGGTTTT 550347 | |||| || |||| | |||||| | || ||||||||||||||||| | Sbjct 14368 AGTAC-AAGG----GTGAAACCAAGACTTTCACTCCTGAGGAAATTTCATCTATGGTTCT 14314 Query 550348 AATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAAT 550407 || || ||||| ||||| || || || | ||| || |||| |||||| || | Sbjct 14313 TATCAAGATGAAGCAAACCGCTGAAGCATTCTTGGGTTCCGATGTTAAGGATGCTGTTGT 14254 Query 550408 AACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTAT 550467 || || || || || || || ||||| || | || || ||||||||||| || ||| Sbjct 14253 TACCGTTCCTGCTTACTTCAACGACTCCCAGAGACAGGCAACTAAAGATGCCGGTACTAT 14194 Query 550468 TGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 |||||| | |||||| | | || || || || ||||| || || || |||| ||||| Sbjct 14193 TGCTGGTTTGAATGTTATGAGAATCATTAACGAGCCTACCGCAGCAGCCATTGCTTATGG 14134 >seq127 Length=61007 Score = 134 bits (148), Expect = 1e-25 Identities = 418/636 (66%), Gaps = 26/636 (4%) Strand=Plus/Plus Query 551958 ACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGA-TTATAATACGCCTATTTCGAG 552016 |||| ||||| | |||||||| |||| || ||| || | | | | || | | || Sbjct 14383 ACCAGAATTGAGATTGATTCATTTGTTGATGGTCATGACTTCTCAGA-GACTTTGACTAG 14441 Query 552017 GGCCAAATTTGAAGATATTTGTTCTGATCTC-TTTAGAAAAACAATTGAA-CCAGTAGAA 552074 |||||||| || || ||| | || || |||| || ||| ||||| ||||| Sbjct 14442 AGCCAAATTCGAGGA-ATTGAATATGGACTTATTTAAGAAGACA-TTGAAGCCAGTTCGC 14499 Query 552075 CAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGT 552134 |||||||| | |||||| ||| | | |||| || | |||| |||| | |||||| Sbjct 14500 CAAGTTTTGAAAGATTCTAAGGTGAAAGAATCTGAAATTGATGATGTTGTCTTGGTTGGT 14559 Query 552135 GGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAA 552194 || ||||| |||||||| || ||| || | ||| ||| ||||| ||||| || Sbjct 14560 GGTTCTACCAGAATTCCAAAGGTTCAAGAGCTTTTAGAGACTTTCTTCAAGGGTAAGAAG 14619 Query 552195 TTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCT 552254 | | ||| | || |||||||| ||||||||||||||||| || |||| |||| | Sbjct 14620 GTTTCGAAGAGTATCAACCCAGATGAAGCTGTTGCCTATGGTGCAGCCGTTCAGGCAGGT 14679 Query 552255 ATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCT 552314 |||| || || ||| ||| | || |||| || | | ||||||| |||| Sbjct 14680 GTTCTCTCAGG------TGAAGAAGGTGTTGAAGATATCGTTTTGATTGATGTTAATCCT 14733 Query 552315 CTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACT 552374 | |||| ||| | ||||| ||| ||| ||||||| | | | || | ||||| ||| Sbjct 14734 TTGACTCTGGGTATTGAAACCTCTGGTGGTGTTATGACAACTTTGATTAAGAGAAACACT 14793 Query 552375 ACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATA---ATCAAACTGCT 552431 ||||||| || || |||| | || ||||| | |||| | ||||| | | Sbjct 14794 CCTATTCCAACAAAGAAGTCTCAGATCTTCTCTACTGCTGTTGATAACCAACAAACCG-T 14852 Query 552432 GTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTT--- 552488 ||| ||||| ||| || || || ||| | |||| | || |||||| Sbjct 14853 GTT--GATTCAGGTTTACGAGGGTGAGAGAGTCATGGCTAAGAAGAA----CAACTTGTT 14906 Query 552489 -GGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGT 552547 |||| ||| | || | ||||| || | || || | || || || |||||||| || Sbjct 14907 GGGTAAGTTTGAATTGAATGGTATCCCATCCGCACCAAGAGGTGTTCCTCAAATTGAGGT 14966 Query 552548 TACTTTCGATATCGATGCCAATGGAATTTTGAATGT 552583 || ||| | | ||| |||| ||||| ||||| || Sbjct 14967 CACATTCACTCTTGATTCCAACGGAATCTTGAAGGT 15002 Score = 127 bits (140), Expect = 2e-23 Identities = 360/548 (66%), Gaps = 10/548 (2%) Strand=Plus/Plus Query 549994 TATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGT 550053 ||| ||||| ||||| || ||||| || ||||||||||||| | || ||| | || Sbjct 13566 TATTGGTATTGATTTGGGTACCACTTACTCTTGTGTTGGTGTTATGAAATCTGGAAGGGT 13625 Query 550054 TGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGA 550113 |||||| | ||||| |||||||||||| | | ||| ||||| ||||| | ||| | || Sbjct 13626 TGAAATCTTGGCCAACGATCAAGGTAACCGGATTACCCCATCATATGTCGCCTTCTCTGA 13685 Query 550114 AACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATAC 550173 | ||||| | | |||||||| | || || | || ||| | || | | |||||| Sbjct 13686 AGGTGAACGTCTTGTTGGTGAGTCTGCTAAGAACCAGGCCCCATCAAACACCAACAATAC 13745 Query 550174 TATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAG--GCA 550231 | | |||| || | ||||| || | |||| |||||| | || |||| | | Sbjct 13746 CGTCTATGATATAAAGAGATTAATGGGTCGTCGTTTCAATGATAAGGCTACTCAGAAGGA 13805 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291 ||| || | || |||| | | |||| | || || |||| | | Sbjct 13806 GATTAGACGTCTT--CCTTACAAGGTTGTCGACAAGAAGGGTCGTCCAGCTATTCAGATT 13863 Query 550292 ACTCATGAAGGATCTGTTAAACAATTTT---CACCAGAACAAATTTCATCTATGGTTTTA 550348 | ||||| || | ||| ||| || | || ||||| || || || || |||| Sbjct 13864 TCCGATGAA-AATAAG--AAAGAATATTACACTCCTGAACAGATCTCTGCTTTGATTTTG 13920 Query 550349 ATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATA 550408 || ||||| |||| || | || | | || | |||| || |||| || | Sbjct 13921 GGTAAGATGAAGCAAATTGCTGAAGATTATCTAGGAAAGAAAGTCACTCATGCCGTTGTT 13980 Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || || ||||| |||||||| | || | || || ||||||||||| || ||| Sbjct 13981 ACCGTCCCTGCATACTTTAATGATGCCCAGAGACAGGCAACTAAAGATGCAGGTACAATT 14040 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 || || | |||||||| | ||| |||| ||||| |||||||| ||| |||| |||||| Sbjct 14041 GCCGGCTTGAATGTTCTCAGAATTGTCAACGAACCAACTGCTGCCGCAATTGCCTATGGA 14100 Query 550529 CTTGATAA 550536 | ||||| Sbjct 14101 TTGGATAA 14108 >seq110 Length=92542 Score = 127 bits (140), Expect = 2e-23 Identities = 157/210 (75%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326 |||| ||||||||| ||| || |||||||||||||| |||||||| |||||| | Sbjct 52922 CAAG-TGAAGGGTAGATTCCTTCTGAATATTGTAATCAGAAAGAGTTCTGCCATCTTCCA 52980 Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386 ||||| || ||||| || | ||| || |||||||| ||||||||||| ||||| || | Sbjct 52981 ACTGTTTACCAGCAAAGATCAATCTCTGTTGATCAGGTGGAATTCCTTCCTTATCCTGGA 53040 Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT--ACATTCGAGAGTAACAGTTTT 563444 | ||||| || || || || || || | || | || | | || || | ||| || Sbjct 53041 TCTTTTGCTTGACATTGTCGATCGTGTCCG-AAGACTCGACCTCCAAG-GTGATAGTCTT 53098 Query 563445 ACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| ||||| || ||||||||||||||||| Sbjct 53099 ACCTGTAAGGGTCTTAACGAAAATTTGCAT 53128 Score = 122 bits (134), Expect = 7e-22 Identities = 257/384 (67%), Gaps = 12/384 (3%) Strand=Plus/Minus Query 552206 TGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGG 552265 |||||| ||||||||||| ||||| ||||||||| ||||||| ||| || | || || Sbjct 77047 TGTTAACCCAGATGAGGCCGTTGCTATTGGTGCCGCCATTCAAGGTGCTGTTTTGTCCGG 76988 Query 552266 ACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGG 552325 || | | || | |||| ||| ||||||||||| | |||||||| Sbjct 76987 TGAAGTTAAGGATG----------TCTTGTTGTTG--GATGTTACTCCATTGTCTCTTGG 76940 Query 552326 TTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTG 552385 | | || || | || ||| | | |||| | || ||||| ||||||||||| Sbjct 76939 TATTGAGACCTTGGGTGGTGTCTTCACTAGATTGATTCCAAGAAACACTACTATTCCAAC 76880 Query 552386 TAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAAT 552445 || ||||||| || || || || | | ||| |||||| | || ||| | | Sbjct 76879 CAAGAAATCTCAAGTCTTCTCCACTGCTGCCGATGGTCAAACATCCGTCGAAATCAGAGT 76820 Query 552446 TTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGA 552505 || |||| || ||| |||| || ||| || || |||||| |||| || Sbjct 76819 GTTCCAAGGTGAGAGAGAATTGGTTAGAGACAACAAGTTGATTGGTAACTTTACCTTGTC 76760 Query 552506 AGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGC 552565 ||| ||||| |||||||| || || || |||||||| ||||| |||||||| ||||| Sbjct 76759 AGGAATTCCACCTGCTCCAAAGGGTGTTCCACAAATTGAGGTTACCTTCGATATTGATGC 76700 Query 552566 CAATGGAATTTTGAATGTGACTGC 552589 | |||| ||| | ||||| |||| Sbjct 76699 CGATGGTATTATCAATGTTTCTGC 76676 >seq1 Length=504328 Score = 95.1 bits (104), Expect = 1e-13 Identities = 137/190 (72%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| || |||||||||| |||||||| ||||| | || || || || ||||| Sbjct 435114 TTTGG--ATGTTGTAATCAGAAAGAGTTCTACCGTCTTCCAACTGCTTACCAGCGAAAAT 435171 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTC 563405 | ||| || |||||||| || ||||| || ||||| ||||| || || || || || Sbjct 435172 CAATCTCTGTTGATCAGGTGGGATTCCCTCCTTATCCTGAATCTTCTGCTTGACATTGTC 435231 Query 563406 AATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGA 563464 ||| || |||| || | | ||| | |||| || ||||| || | || ||||||| Sbjct 435232 AATGGTGTCAGAA-GACTCGACTTCCAAGGTAATGGTCTTACCCGTCAAGGTCTTAACGA 435290 Query 563465 AAATTTGCAT 563474 |||||||||| Sbjct 435291 AAATTTGCAT 435300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029286533672710