Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq115 100 5e-16
>seq115
Length=359903
Score = 100 bits (110), Expect = 5e-16
Identities = 456/717 (64%), Gaps = 7/717 (1%)
Strand=Plus/Minus
Query 221781 ACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCA 221840
|||| || || || || | || |||||| ||| | || ||| || ||||||| ||
Sbjct 5850 ACTTAATAGTACCGAGATTCTTTTGATTACTCTTTCTGTTACAAGCATCTTTGTAGATCA 5791
Query 221841 TAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGCGC 221900
| || ||| ||||| || || ||| ||| ||||| | ||| || | | ||
Sbjct 5790 TGAATGGAGTACCAGTTTCAGTTTGGGCCTCCAAAATCTGATACCAAAGCTTTTGTGCCT 5731
Query 221901 TCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACT 221960
| || || || | | ||| || ||||||||| ||| || | | || ||||
Sbjct 5730 TGACAGTTCTTCTACCACGACCTTC---CTTTTCATATTTGGTGTACAATTTTTCGAACT 5674
Query 221961 TTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCT 222020
|||||||| | ||| ||||| ||| | || | | || | |||| |
Sbjct 5673 CATCACCGTAGACATCGGAAAGGCCAGGAGCTTCAGAAGGTGAGAACAAAGTCCATGGAC 5614
Query 222021 TGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTC 222080
|| |||| || | || |||||| || || || ||||| || || | || | ||| |
Sbjct 5613 CATTTTCTTCCACACGCTTCATGAAAAGATCAGGAATCCAAAGAGCTGGGAACAAATCAC 5554
Query 222081 TGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAG 222140
|| | ||| ||| || | ||| ||| | ||| | || || || || || |
Sbjct 5553 GGGCTCTAATCTCTTCCTTACCATGGTTCATCCGGATATCGATGAAATCGAAGATATCTG 5494
Query 222141 CGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCA 222200
| ||||| || |||| ||||||||| | || || || |||||||| ||||| ||||| |
Sbjct 5493 CATGCCAAGGTTCCAAATAGACGGCAATGGCACCAGGACGCTTGTTACCACCTTGATCGA 5434
Query 222201 CCATCCTCTC-CAGAGC-GTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACC 222258
| || ||| ||| | |||||||| |||| | || | | || || || |||
Sbjct 5433 C-ATA-TCTGGCAGTACTGTTGAAGACACGAATCATAGGAATGATACCATTAGAAGTACC 5376
Query 222259 GTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATGCCGATACC 222318
||||| || |||||| | || || | | |||| | | ||| ||||||||
Sbjct 5375 ATTGGTACCTGCAATGTATGAGCCAGTAGCACGAATGTTATGGATATGCATACCGATACC 5316
Query 222319 ACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGA 222378
||||||| ||| || || | ||||| ||| | ||| || ||| || || || ||
Sbjct 5315 ACCGGCGGTTTTAGAAATTAAAGCGCACTGCTTCAAAGTATCGTAGATACCTTCGATGGA 5256
Query 222379 GTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTT 222438
||| || || | | | || ||||| || |||||||||| | | | | || || ||
Sbjct 5255 GTCATCTTTCATGGCAACCAAGAAACATGAAGACATCTGAGGTCTAGGAGTACCTGCATT 5196
Query 222439 AAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTC 222495
|||| || || || || || ||||| | ||||||| || | ||| | |||
Sbjct 5195 GAACAAGGTTGGTGAAGCATGCGTGAAGTAACGTTTAGACATGAGGTTGTAAGACTC 5139
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928842721709760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |