Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq115 311 1e-79
>seq115
Length=359903
Score = 311 bits (344), Expect = 1e-79
Identities = 1120/1723 (65%), Gaps = 48/1723 (3%)
Strand=Plus/Plus
Query 75270 TCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329
||||| || | ||| || ||||| || || |||| || || |||||||| | |
Sbjct 5135 TCTTG-AGTCTTACAACCTCATGTCTAAACGTTACTTCACGCATGCTTCACCAACCTTGT 5193
Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389
||||||| ||||| || ||||| |||||||| || ||| | | |||| || || |
Sbjct 5194 TCAATGCAGGTACTCCTAGACCTCAGATGTCTTCATGTTTCTTGGTTGCCATGAAAGATG 5253
Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449
|||| ||| | |||||||| | ||| | | | |||| || ||| || || || |
Sbjct 5254 ACTCCATCGAAGGTATCTACGATACTTTGAAGCAGTGCGCTTTAATTTCTAAAACCGCCG 5313
Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509
| ||||| || ||||| |||||| | | | || | | || ||| || || |
Sbjct 5314 GTGGTATCGGTATGCATATCCATAACATTCGTGCTACTGGCTCATACATTGCAGGTACCA 5373
Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569
||||| || ||||||| ||||| ||| |||| || || ||| || || | ||||
Sbjct 5374 ATGGTACTTCTAATGGTATCATTCCTATGATTCGTGTCTTCAACAGTACTGCCAGATATG 5433
Query 75570 TAAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCATGGC 75623
| |||||| || | |||| | || |||| || ||||| |||||||| ||||
Sbjct 5434 TCGATCAAGGTGG---TAACAAGCGTCCTGGTGCCATTGCCGTCTATTTGGAACCTTGGC 5490
Query 75624 ATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGT 75683
|||| |||||| | || ||| | || | || | ||||| ||| | |||||| | |
Sbjct 5491 ATGCAGATATCTTCGATTTCATCGATATCCGGATGAACCATGGTAAGGAAGAGATTAGAG 5550
Query 75684 GTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743
| ||| | || || | || |||||||| || |||||||||||||| || || ||
Sbjct 5551 CCCGTGATTTGTTCCCAGCTCTTTGGATTCCTGATCTTTTCATGAAGCGTGTGGAAGAAA 5610
Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTG 75803
||||| |||| || | |||| || | || || || || ||||| | ||||
Sbjct 5611 ATGGTCCATGGACTTTGTTCTCACCTTCTGAAGCTCCTGGCCTTTCCGATGTCTACGGTG 5670
Query 75804 AGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTAC 75863
| ||||| ||| | ||||| || |||||| |||| ||| | | | ||||| |
Sbjct 5671 ATGAGTTCGAAAAATTGTACACCAAATATGAAAAGGAAGGTCGTGGTAGAAGAACTGT-C 5729
Query 75864 CAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATAT 75922
|| | | | | ||||| | ||| | | | || || || ||||| || ||||
Sbjct 5730 AAGGCACAAAAGCTTTGGTATCAGATTTTGGAGGCCCAAACTGAAACTGGTACTCCATTC 5789
Query 75923 ATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAG 75982
||| | ||||| ||||||||||||| |||||||| ||||||||| | || || || |||
Sbjct 5790 ATGATCTACAAAGATGCTTGTAACAGAAAGAGTAATCAAAAGAATCTCGGTACTATTAAG 5849
Query 75983 AGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACG--GCTGTTT 76040
|| || | ||| || || | || ||| | | | | ||| | | ||| |
Sbjct 5850 TCATCCAACTTATGCTGTGAGGTTGTTGAATACTC--CTCACCAAAAGAAGTTGGTGTCT 5907
Query 76041 GCAATTTGGCATCAATCGCCCTTCCA-AAGTATGTCAAT--GAAGAG-ACTCGCACT--T 76094
| |||||||| ||| |||||| | | | ||| || ||| | ||| | |
Sbjct 5908 GTAATTTGGCTAATATCTGTCTTCCAGCATTCGTTGAATCAGATGAGAAATCGTCTTGGT 5967
Query 76095 TTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCA 76154
| | | ||| ||| | ||| ||||||| ||| ||||||| || | ||| |||| |
Sbjct 5968 TCAACTTTGAGAAATTACATCAAATCACTAAGGTTGTTACTCGTAACTTGAACAGAGTTA 6027
Query 76155 TTGACAGAAATTTTTATCCCGTT-GAGACTGCGCGAAAGTCTAATATGCGACACAGACCT 76213
| ||||| || | ||||| ||| ||| || || || || |||||| || | ||||||
Sbjct 6028 TAGACAGGAACTACTATCCAGTTCCAGA-GGCCCGTAATTCGAATATGAGAAATAGACCT 6086
Query 76214 ATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGC--CG-CTACGCATTT 76270
|||| | | ||| | |||||||| || || || || || ||| || |||| | ||
Sbjct 6087 ATTGCTATCGGTATCCAAGGTCTTGCAGA--TACTTTCTTCATGCTTCGTCTAC-CGTTC 6143
Query 76271 GA---TTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCA 76327
|| | || ||||| || ||||| || |||||||| || | || || ||
Sbjct 6144 GAGAGTCCA---GAAGCTCGTGAATTGAATATTCAGATCTTTGAGACTTTATACCATGCT 6200
Query 76328 TCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGT 76387
| |||| | |||| || | |||| | ||||| ||||| |||| || ||
Sbjct 6201 GCATTGGAAGAATCTTGTCAACTAGCTGCCGAGGAAGGTACCTATTCAACATACGAAGGA 6260
Query 76388 TCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAA--GCTCA 76445
|| || || || |||| | ||||| | |||||||| |||| |||||||| | ||
Sbjct 6261 TCGCCAGCATCTAAAGGTATCCTTCAATATGATATGT-GGAATAAGAAACCAACCGATC- 6318
Query 76446 ACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT 76505
| |||||||||| | |||| | || |||| || | | || | |
Sbjct 6319 TTTGGGACTGGGATGACTTAAAGGCTCAAGTCGCCAAGAAAGGATTGAGGAATTCGTTGT 6378
Query 76506 TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 76565
| |||||||||||||||| || || || | || || ||||| | || ||||| || |
Sbjct 6379 TATTGGCACCAATGCCAACTGCATCTACATCTCAGATTATGGGTTACAACGAATGTTTCG 6438
Query 76566 AACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCA 76625
| |||| |||| | |||||||| | |||||| | || |||||||| ||||| |
Sbjct 6439 AGCCATTCACATCCAACATCTATCAAAGAAGAGTTTTGGCCGGTGAGTTCCAGATTGTTA 6498
Query 76626 ACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATC 76685
| | | | || ||| ||| | || ||| ||||| || | ||||||||
Sbjct 6499 ATCCTTATATGTTGAAGGACTTCATCGATATGGGTATCTGGAGTAATGCAATGAAGGACT 6558
Query 76686 TCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGA 76745
| || | || | |||||| || || || | || || | ||||| | ||||||
Sbjct 6559 TTATCATTAAGGATAATGGTTCTATCCAGAACTTACCAAATGTGCCAGAGAAATTCAAGA 6618
Query 76746 ATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATC 76805
| | || || || || ||||| ||| |||| ||||||||| ||||| || ||
Sbjct 6619 AATTGTATCGTACCGTTTGGGAGATCTCACAGAAATCTGTCATTGATATGGCTGCCGACA 6678
Query 76806 GTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCA--TGGAAAGTCCAACG 76861
| ||| | ||| |||| ||| ||| ||||| |||||| || || |||||
Sbjct 6679 GAGGTGCATACATCTGTCAA--TCACAGTCCATGAA--TATTCATTTGCAATCCCCAACT 6734
Query 76862 ATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATG 76921
||| ||| | |||| ||||| | || | ||||| |||| || || || || |||
Sbjct 6735 ATGGGTAAGTTGACTTCCATGCACTTCTATGGATGGAAGAAGGGTCTTAAGACTGGTATG 6794
Query 76922 TACTATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTTCA 76964
||||| | || || |||| || || | || |||||||
Sbjct 6795 TACTACTTGCGTACACAGGCTGCCGCACGTGCCATCCAGTTCA 6837
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596568265175520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |