Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq115 311 1e-79 >seq115 Length=359903 Score = 311 bits (344), Expect = 1e-79 Identities = 1120/1723 (65%), Gaps = 48/1723 (3%) Strand=Plus/Plus Query 75270 TCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329 ||||| || | ||| || ||||| || || |||| || || |||||||| | | Sbjct 5135 TCTTG-AGTCTTACAACCTCATGTCTAAACGTTACTTCACGCATGCTTCACCAACCTTGT 5193 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 ||||||| ||||| || ||||| |||||||| || ||| | | |||| || || | Sbjct 5194 TCAATGCAGGTACTCCTAGACCTCAGATGTCTTCATGTTTCTTGGTTGCCATGAAAGATG 5253 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 |||| ||| | |||||||| | ||| | | | |||| || ||| || || || | Sbjct 5254 ACTCCATCGAAGGTATCTACGATACTTTGAAGCAGTGCGCTTTAATTTCTAAAACCGCCG 5313 Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509 | ||||| || ||||| |||||| | | | || | | || ||| || || | Sbjct 5314 GTGGTATCGGTATGCATATCCATAACATTCGTGCTACTGGCTCATACATTGCAGGTACCA 5373 Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569 ||||| || ||||||| ||||| ||| |||| || || ||| || || | |||| Sbjct 5374 ATGGTACTTCTAATGGTATCATTCCTATGATTCGTGTCTTCAACAGTACTGCCAGATATG 5433 Query 75570 TAAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCATGGC 75623 | |||||| || | |||| | || |||| || ||||| |||||||| |||| Sbjct 5434 TCGATCAAGGTGG---TAACAAGCGTCCTGGTGCCATTGCCGTCTATTTGGAACCTTGGC 5490 Query 75624 ATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGT 75683 |||| |||||| | || ||| | || | || | ||||| ||| | |||||| | | Sbjct 5491 ATGCAGATATCTTCGATTTCATCGATATCCGGATGAACCATGGTAAGGAAGAGATTAGAG 5550 Query 75684 GTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743 | ||| | || || | || |||||||| || |||||||||||||| || || || Sbjct 5551 CCCGTGATTTGTTCCCAGCTCTTTGGATTCCTGATCTTTTCATGAAGCGTGTGGAAGAAA 5610 Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTG 75803 ||||| |||| || | |||| || | || || || || ||||| | |||| Sbjct 5611 ATGGTCCATGGACTTTGTTCTCACCTTCTGAAGCTCCTGGCCTTTCCGATGTCTACGGTG 5670 Query 75804 AGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTAC 75863 | ||||| ||| | ||||| || |||||| |||| ||| | | | ||||| | Sbjct 5671 ATGAGTTCGAAAAATTGTACACCAAATATGAAAAGGAAGGTCGTGGTAGAAGAACTGT-C 5729 Query 75864 CAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATAT 75922 || | | | | ||||| | ||| | | | || || || ||||| || |||| Sbjct 5730 AAGGCACAAAAGCTTTGGTATCAGATTTTGGAGGCCCAAACTGAAACTGGTACTCCATTC 5789 Query 75923 ATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAG 75982 ||| | ||||| ||||||||||||| |||||||| ||||||||| | || || || ||| Sbjct 5790 ATGATCTACAAAGATGCTTGTAACAGAAAGAGTAATCAAAAGAATCTCGGTACTATTAAG 5849 Query 75983 AGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACG--GCTGTTT 76040 || || | ||| || || | || ||| | | | | ||| | | ||| | Sbjct 5850 TCATCCAACTTATGCTGTGAGGTTGTTGAATACTC--CTCACCAAAAGAAGTTGGTGTCT 5907 Query 76041 GCAATTTGGCATCAATCGCCCTTCCA-AAGTATGTCAAT--GAAGAG-ACTCGCACT--T 76094 | |||||||| ||| |||||| | | | ||| || ||| | ||| | | Sbjct 5908 GTAATTTGGCTAATATCTGTCTTCCAGCATTCGTTGAATCAGATGAGAAATCGTCTTGGT 5967 Query 76095 TTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCA 76154 | | | ||| ||| | ||| ||||||| ||| ||||||| || | ||| |||| | Sbjct 5968 TCAACTTTGAGAAATTACATCAAATCACTAAGGTTGTTACTCGTAACTTGAACAGAGTTA 6027 Query 76155 TTGACAGAAATTTTTATCCCGTT-GAGACTGCGCGAAAGTCTAATATGCGACACAGACCT 76213 | ||||| || | ||||| ||| ||| || || || || |||||| || | |||||| Sbjct 6028 TAGACAGGAACTACTATCCAGTTCCAGA-GGCCCGTAATTCGAATATGAGAAATAGACCT 6086 Query 76214 ATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGC--CG-CTACGCATTT 76270 |||| | | ||| | |||||||| || || || || || ||| || |||| | || Sbjct 6087 ATTGCTATCGGTATCCAAGGTCTTGCAGA--TACTTTCTTCATGCTTCGTCTAC-CGTTC 6143 Query 76271 GA---TTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCA 76327 || | || ||||| || ||||| || |||||||| || | || || || Sbjct 6144 GAGAGTCCA---GAAGCTCGTGAATTGAATATTCAGATCTTTGAGACTTTATACCATGCT 6200 Query 76328 TCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGT 76387 | |||| | |||| || | |||| | ||||| ||||| |||| || || Sbjct 6201 GCATTGGAAGAATCTTGTCAACTAGCTGCCGAGGAAGGTACCTATTCAACATACGAAGGA 6260 Query 76388 TCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAA--GCTCA 76445 || || || || |||| | ||||| | |||||||| |||| |||||||| | || Sbjct 6261 TCGCCAGCATCTAAAGGTATCCTTCAATATGATATGT-GGAATAAGAAACCAACCGATC- 6318 Query 76446 ACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT 76505 | |||||||||| | |||| | || |||| || | | || | | Sbjct 6319 TTTGGGACTGGGATGACTTAAAGGCTCAAGTCGCCAAGAAAGGATTGAGGAATTCGTTGT 6378 Query 76506 TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 76565 | |||||||||||||||| || || || | || || ||||| | || ||||| || | Sbjct 6379 TATTGGCACCAATGCCAACTGCATCTACATCTCAGATTATGGGTTACAACGAATGTTTCG 6438 Query 76566 AACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCA 76625 | |||| |||| | |||||||| | |||||| | || |||||||| ||||| | Sbjct 6439 AGCCATTCACATCCAACATCTATCAAAGAAGAGTTTTGGCCGGTGAGTTCCAGATTGTTA 6498 Query 76626 ACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATC 76685 | | | | || ||| ||| | || ||| ||||| || | |||||||| Sbjct 6499 ATCCTTATATGTTGAAGGACTTCATCGATATGGGTATCTGGAGTAATGCAATGAAGGACT 6558 Query 76686 TCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGA 76745 | || | || | |||||| || || || | || || | ||||| | |||||| Sbjct 6559 TTATCATTAAGGATAATGGTTCTATCCAGAACTTACCAAATGTGCCAGAGAAATTCAAGA 6618 Query 76746 ATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATC 76805 | | || || || || ||||| ||| |||| ||||||||| ||||| || || Sbjct 6619 AATTGTATCGTACCGTTTGGGAGATCTCACAGAAATCTGTCATTGATATGGCTGCCGACA 6678 Query 76806 GTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCA--TGGAAAGTCCAACG 76861 | ||| | ||| |||| ||| ||| ||||| |||||| || || ||||| Sbjct 6679 GAGGTGCATACATCTGTCAA--TCACAGTCCATGAA--TATTCATTTGCAATCCCCAACT 6734 Query 76862 ATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATG 76921 ||| ||| | |||| ||||| | || | ||||| |||| || || || || ||| Sbjct 6735 ATGGGTAAGTTGACTTCCATGCACTTCTATGGATGGAAGAAGGGTCTTAAGACTGGTATG 6794 Query 76922 TACTATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTTCA 76964 ||||| | || || |||| || || | || ||||||| Sbjct 6795 TACTACTTGCGTACACAGGCTGCCGCACGTGCCATCCAGTTCA 6837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568265175520