Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq1 134 3e-26
seq110 125 1e-23
>seq1
Length=504328
Score = 134 bits (148), Expect = 3e-26
Identities = 175/242 (72%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358
||| ||||||||||||||| | | | || || || | ||| | ||| || ||| |
Sbjct 435063 GTTCAATAATACCACCTCTCAATCTAAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGT 435122
Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418
| |||||||| | |||| | || ||||| || |||||||| || || ||||||||||
Sbjct 435123 TGTAATCAGAAAGAGTTCTACCGTCTTCCAACTGCTTACCAGCGAAAATCAATCTCTGTT 435182
Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478
|||||||||| ||||| || ||||| || || || | || ||||| || | || |
Sbjct 435183 GATCAGGTGGGATTCCCTCCTTATCCTGAATCTTCTGCTTGACATTGTCAATGGTGTCAG 435242
Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTT 192538
| || || ||||| | |||||||| ||||| || || || |||| || || ||||||
Sbjct 435243 AAGACTCGACTTCCAAGGTAATGGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATTC 435302
Query 192539 TA 192540
||
Sbjct 435303 TA 435304
>seq110
Length=92542
Score = 125 bits (138), Expect = 1e-23
Identities = 167/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 192308 TACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAG 192367
|||||||||| | | || || || || | |||| || || ||||| |||||||
Sbjct 52900 TACCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTCTGAATATTGTAATCAG 52959
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| | |||| |||| ||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 52960 AAAGAGTTCTGCCATCTTCCAACTGTTTACCAGCAAAGATCAATCTCTGTTGATCAGGTG 53019
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| |||||||| ||||| || || || | || ||||| || | || || || || |
Sbjct 53020 GAATTCCTTCCTTATCCTGGATCTTTTGCTTGACATTGTCGATCGTGTCCGAAGACTCGA 53079
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
| || | || || || ||||| || | || |||| || || ||||| ||
Sbjct 53080 CCTCCAAGGTGATAGTCTTACCTGTAAGGGTCTTAACGAAAATTTGCATCTT 53131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984477742156650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |