Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 8e-16 >seq1 Length=504328 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 110266 ATTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGA 110325 ||||| ||||||||| || || || || || || || || ||||||||| | ||| || Sbjct 435307 ATTTAGAATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACCATTACCTTGGAAGTCGA 435248 Query 110326 GCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGT 110385 | || || || | | | | || || ||||||||| || || || || | || Sbjct 435247 GTCTTCTGACACCATTGACAATGTCAAGCAGAAGATTCAGGATAAGGAGGGAATCCCACC 435188 Query 110386 GGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGA 110445 |||||||| ||| | |||| || ||||| ||| |||| || | ||||| | | || Sbjct 435187 TGATCAACAGAGATTGATTTTCGCTGGTAAGCAGTTGGAAGACGGTAGAACTCTTTCTGA 435128 Query 110446 TTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||||||| ||||| || || || | ||| |||| | ||| || |||| || Sbjct 435127 TTACAACATCCAAAAGGAGTCCACTCTTCACTTGGTTCTTAGATTGAGAGGTGG 435074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840699360247