Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq110 113 4e-20 seq1 109 4e-19 >seq110 Length=92542 Score = 113 bits (124), Expect = 4e-20 Identities = 170/242 (70%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 || ||||||||||| || || || | ||||| || || || ||| | || ||| || Sbjct 53131 AAGATGCAAATTTTCGTTAAGACCCTTACAGGTAAGACTATCACCTTGGAGGTCGAGTCT 53072 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 || || ||| | | || || |||||||| ||||| ||||| | || ||| Sbjct 53071 TCGGACACGATCGACAATGTCAAGCAAAAGATCCAGGATAAGGAAGGAATTCCACCTGAT 53012 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 || |||||| | || | ||| ||||||||| |||| || | || ||| | | || ||| Sbjct 53011 CAACAGAGATTGATCTTTGCTGGTAAACAGTTGGAAGATGGCAGAACTCTTTCTGATTAC 52952 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAATAAA 107792 || ||||| ||||| ||||| | ||| |||| ||||||||| |||| || || || || Sbjct 52951 AATATTCAGAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGTAAGAAGAAG 52892 Query 107793 AA 107794 || Sbjct 52891 AA 52890 >seq1 Length=504328 Score = 109 bits (120), Expect = 4e-19 Identities = 164/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 107550 TTTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG 107609 |||| |||||||||||| || || || || || || || ||||||||| | ||| ||| Sbjct 435306 TTTAGAATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACCATTACCTTGGAAGTCGAG 435247 Query 107610 GCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTG 107669 || || || | | | | || || || |||||| ||||| || || | || Sbjct 435246 TCTTCTGACACCATTGACAATGTCAAGCAGAAGATTCAGGATAAGGAGGGAATCCCACCT 435187 Query 107670 GATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGAC 107729 ||||| |||||| | |||| || ||||| ||| |||| |||| | ||| | | || Sbjct 435186 GATCAACAGAGATTGATTTTCGCTGGTAAGCAGTTGGAAGACGGTAGAACTCTTTCTGAT 435127 Query 107730 TACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||||||| ||||||||||| || | ||| |||| | |||||| |||| || Sbjct 435126 TACAACATCCAAAAGGAGTCCACTCTTCACTTGGTTCTTAGATTGAGAGGTGG 435074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398875929825331