Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq110 179 7e-40
seq1 179 7e-40
>seq110
Length=92542
Score = 179 bits (198), Expect = 7e-40
Identities = 177/229 (77%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || || ||||| || |||||||| ||||| ||||| |||||||
Sbjct 52900 TACCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTCTGAATATTGTAATCAG 52959
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| ||| |||| || ||||| | ||||| ||||||||||| | ||| |||||||| || |
Sbjct 52960 AAAGAGTTCTGCCATCTTCCAACTGTTTACCAGCAAAGATCAATCTCTGTTGATCAGGTG 53019
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| |||||||||||||| || |||||| || ||||| || ||||| || || || |
Sbjct 53020 GAATTCCTTCCTTATCCTGGATCTTTTGCTTGACATTGTCGATCGTGTCCGAAGACTCGA 53079
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| ||||| || || ||||| ||||| | ||||| || || || |||||
Sbjct 53080 CCTCCAAGGTGATAGTCTTACCTGTAAGGGTCTTAACGAAAATTTGCAT 53128
>seq1
Length=504328
Score = 179 bits (198), Expect = 7e-40
Identities = 180/231 (78%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | ||||| ||||| ||||| || || || || || || |||||||
Sbjct 435072 TACCACCTCTCAATCTAAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAATCAG 435131
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| ||| ||||||||||||| | || || ||||| || || | ||| |||||||| || |
Sbjct 435132 AAAGAGTTCTACCGTCTTCCAACTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGTG 435191
Query 82702 GTATTCCTTCCTTATCTTGAATCTT-TGCTTTTACATTTTCAATCGTATCATTAGGTTCT 82760
| ||||| |||||||| |||||||| ||| || ||||| ||||| || ||| || ||
Sbjct 435192 GGATTCCCTCCTTATCCTGAATCTTCTGC-TTGACATTGTCAATGGTGTCAGAAGACTCG 435250
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
|||||||| || || ||||| || ||||| ||||| || || || ||||||
Sbjct 435251 ACTTCCAAGGTAATGGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATT 435301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981824948240681
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |