Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq110 120 7e-22
seq1 107 5e-18
>seq110
Length=92542
Score = 120 bits (132), Expect = 7e-22
Identities = 147/201 (73%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || ||||| || || ||||| ||||| || || ||| ||||| ||||
Sbjct 53113 AAGACCCTTACAGGTAAGACTATCACCTTGGAGGTCGAGTCTTCGGACACGATCGACAAT 53054
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||||||||||| || || || ||||||||| || || || ||| | |||||
Sbjct 53053 GTCAAGCAAAAGATCCAGGATAAGGAAGGAATTCCACCTGATCAACAGAGATTGATCTTT 52994
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || || |||||||||||||| || ||| | | |||||||| | ||||| || |||
Sbjct 52993 GCTGGTAAACAGTTGGAAGATGGCAGAACTCTTTCTGATTACAATATTCAGAAGGAATCT 52934
Query 206365 ACTCTTCACCTTGTTTTGAGA 206385
|| |||||| | || ||||||
Sbjct 52933 ACCCTTCACTTGGTCTTGAGA 52913
>seq1
Length=504328
Score = 107 bits (118), Expect = 5e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || || || |||||||| || ||||||||| | || || |||||
Sbjct 435276 ACGGGTAAGACCATTACCTTGGAAGTCGAGTCTTCTGACACCATTGACAATGTCAAGCAG 435217
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
|||||||| || || || ||||| || || || ||| | || ||||| || |||
Sbjct 435216 AAGATTCAGGATAAGGAGGGAATCCCACCTGATCAACAGAGATTGATTTTCGCTGGTAAG 435157
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
||||||||||| || || ||| | | ||||||||| |||| || ||||| |||||||||
Sbjct 435156 CAGTTGGAAGACGGTAGAACTCTTTCTGATTACAACATCCAAAAGGAGTCCACTCTTCAC 435097
Query 206374 CTTGTTTTGAGA 206385
| ||| | |||
Sbjct 435096 TTGGTTCTTAGA 435085
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181818089567859
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |