Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq110 120 7e-22 seq1 107 5e-18 >seq110 Length=92542 Score = 120 bits (132), Expect = 7e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || ||||| || || ||||| ||||| || || ||| ||||| |||| Sbjct 53113 AAGACCCTTACAGGTAAGACTATCACCTTGGAGGTCGAGTCTTCGGACACGATCGACAAT 53054 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||||||||||| || || || ||||||||| || || || ||| | ||||| Sbjct 53053 GTCAAGCAAAAGATCCAGGATAAGGAAGGAATTCCACCTGATCAACAGAGATTGATCTTT 52994 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || || |||||||||||||| || ||| | | |||||||| | ||||| || ||| Sbjct 52993 GCTGGTAAACAGTTGGAAGATGGCAGAACTCTTTCTGATTACAATATTCAGAAGGAATCT 52934 Query 206365 ACTCTTCACCTTGTTTTGAGA 206385 || |||||| | || |||||| Sbjct 52933 ACCCTTCACTTGGTCTTGAGA 52913 >seq1 Length=504328 Score = 107 bits (118), Expect = 5e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || || || |||||||| || ||||||||| | || || ||||| Sbjct 435276 ACGGGTAAGACCATTACCTTGGAAGTCGAGTCTTCTGACACCATTGACAATGTCAAGCAG 435217 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 |||||||| || || || ||||| || || || ||| | || ||||| || ||| Sbjct 435216 AAGATTCAGGATAAGGAGGGAATCCCACCTGATCAACAGAGATTGATTTTCGCTGGTAAG 435157 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||||||||||| || || ||| | | ||||||||| |||| || ||||| ||||||||| Sbjct 435156 CAGTTGGAAGACGGTAGAACTCTTTCTGATTACAACATCCAAAAGGAGTCCACTCTTCAC 435097 Query 206374 CTTGTTTTGAGA 206385 | ||| | ||| Sbjct 435096 TTGGTTCTTAGA 435085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181818089567859