Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq110 105 6e-18 seq1 100 3e-16 >seq110 Length=92542 Score = 105 bits (116), Expect = 6e-18 Identities = 168/241 (70%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 35496 TCATCTCTTTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAA 35555 || ||| || || ||||| | || ||||| ||||| || | ||| ||||| |||| Sbjct 52888 TCTTCTTCTTCTTACCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTCTGAA 52947 Query 35556 TGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCT 35615 | |||||||| | | |||| | || |||| ||| ||||| ||||| ||||| | || Sbjct 52948 TATTGTAATCAGAAAGAGTTCTGCCATCTTCCAACTGTTTACCAGCAAAGATCAATCTCT 53007 Query 35616 GCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGT 35675 | || || | |||| | ||||| ||| |||||||||||| | | | | | ||||| Sbjct 53008 GTTGATCAGGTGGAATTCCTTCCTTATCCTGGATCTTTTGCTTGACATTGTCGATCGTGT 53067 Query 35676 CGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735 | || || ||||||| ||||| || ||||| || | || || || || || |||| Sbjct 53068 CCGAAGACTCGACCTCCAAGGTGATAGTCTTACCTGTAAGGGTCTTAACGAAAATTTGCA 53127 Query 35736 T 35736 | Sbjct 53128 T 53128 >seq1 Length=504328 Score = 100 bits (110), Expect = 3e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| ||||||||||| | | |||| |||| |||| ||||||||| || || Sbjct 435109 CTCCTTTTGGATGTTGTAATCAGAAAGAGTTCTACCGTCTTCCAACTGCTTACCAGCGAA 435168 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| | ||| || || | || | | |||||| ||| ||||| ||||| | | | Sbjct 435169 AATCAATCTCTGTTGATCAGGTGGGATTCCCTCCTTATCCTGAATCTTCTGCTTGACATT 435228 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || || || |||| || || || ||||||||||| || || || Sbjct 435229 GTCAATGGTGTCAGAAGACTCGACTTCCAAGGTAATGGTCTTACCCGTCAAGGTCTTAAC 435288 Query 35725 AAATATCTGCATTCT 35739 || || |||||||| Sbjct 435289 GAAAATTTGCATTCT 435303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450792591349320