Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq115 93.3 4e-14 >seq115 Length=359903 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/232 (69%), Gaps = 3/232 (1%) Strand=Plus/Minus Query 130753 aTTAATGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGG 130812 ||||| || || || ||||| |||| || | ||| || |||||| ||||| || Sbjct 6500 ATTAACAATCTGGAACTCACCGGCCAAAACTCTTCTTTGATAGATGTTGGATGTGAATGG 6441 Query 130813 TTCAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCAC 130872 || || ||||||||| || | || || | ||||| ||| || ||||| ||||| Sbjct 6440 CTCGAAACATTCGTTGTAACCCATAATCTGAGATGTAGATGCAGTTGGCATTGGTGCCAA 6381 Query 130873 TAATAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCA 130932 ||| | ||||| | | || | | | | || || ||| || |||||||| ||||| Sbjct 6380 TAACAACGAATTCCTCAATCCTTTCTTGGCGACTTGAGCCTTTAAGTCATCCCAGTCCCA 6321 Query 130933 TAGAGAGGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTA 130984 ||| ||| ||||| || |||||||||||| |||| || || |||||| Sbjct 6320 AAGATCGGTTGGTTTC---TTATTCCACATATCATATTGAAGGATACCTTTA 6272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933472979048