Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq115 102 9e-17 >seq115 Length=359903 Score = 102 bits (112), Expect = 9e-17 Identities = 137/189 (72%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 78188 GTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATAC 78247 |||| ||||| |||||||| || ||||| ||||||||||||||||| || | |||||| Sbjct 6810 GTGTACGCAAGTAGTACATACCAGTCTTAAGACCCTTCTTCCATCCATAGAAGTGCATGG 6751 Query 78248 TCGACAGCTTGGCCAGACTCGGG--TTCTCCATGAAGATGTTGAGCGACTGGGACTGGTC 78305 | || ||| ||| | | ||| || |||| || || | ||||| || || Sbjct 6750 AAGTCAACTTACCCATAGTTGGGGATTGCAAATGA--ATATTCATGGACTGTGATTGACA 6693 Query 78306 GATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGAT 78365 |||||| ||||| | |||||| ||||| || ||||| || || || | |||||||| | Sbjct 6692 GATGTATGCACCTCTGTCGGCAGCCATATCAATGACAGATTTCTGTGAGATCTCCCAAAC 6633 Query 78366 GGTCCGGTA 78374 ||| || || Sbjct 6632 GGTACGATA 6624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548523572675760