Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq110 147 5e-30
>seq110
Length=92542
Score = 147 bits (162), Expect = 5e-30
Identities = 164/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| || || ||||| || || | ||||||||| | | |||||| ||
Sbjct 52913 TCTCAAGACCAAGTGAAGGGTAGATTCCTTCTGAATATTGTAATCAGAAAGAGTTCTGCC 52972
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | ||| || ||||| ||||| | || ||||| || || ||||| ||||||||
Sbjct 52973 ATCTTCCAACTGTTTACCAGCAAAGATCAATCTCTGTTGATCAGGTGGAATTCCTTCCTT 53032
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|| |||||||||||||| ||| ||||| ||||| || | || || || || |||||
Sbjct 53033 ATCCTGGATCTTTTGCTTGACATTGTCGATCGTGTCCGAAGACTCGACCTCCAAGGTGAT 53092
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || || | || || | ||| | |||||| ||
Sbjct 53093 AGTCTTACCTGTAAGGGTCTTAACGAAAATTTGCATCTT 53131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192528465004226
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |