Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq115 316 3e-81
seq173 178 2e-39
seq96 145 1e-29
>seq115
Length=359903
Score = 316 bits (350), Expect = 3e-81
Identities = 1347/2103 (64%), Gaps = 49/2103 (2%)
Strand=Plus/Minus
Query 76811 TGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCT 76870
|||||| | |||||||||||||| || |||||| ||||||| ||||| ||||||
Sbjct 6809 TGTACGCAAGTAGTACATACCAGTCTTAAGACCCTTCTTCCATCCATAGAAGTGCATGGA 6750
Query 76871 TGTCAGTTTGGA-ATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGA 76929
|||| || ||| | || || | |||||||||||| ||||| |||| ||
Sbjct 6749 AGTCAACTTACCCATAGTTGGGGATTGCAA-ATGAATATTCATGGACTGTGATTGACAGA 6691
Query 76930 TGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAG 76989
|| | || ||||| || || ||||| | || | | || || | || ||||||| |
Sbjct 6690 TGTATGCACCTCTGTCGGCAGCCATATCAATGACAGATTTCTGTGAGATCTCCCAAACGG 6631
Query 76990 TTTTGAAAACTTGTTTGATATCATCTGGAAGGTTTG-TA--TTTTGAATGGAACCACCAT 77046
| | | || |||| | ||||| | |||| || || || || |||||| ||
Sbjct 6630 TACGATACAATTTCTTGAATTTCTCTGGCACATTTGGTAAGTTCTGGATAGAACCATTAT 6571
Query 77047 CTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAA 77106
| || || | ||| || ||| | |||| | | | || | || | | |
Sbjct 6570 CCTTAATGATAAAGTCCTTCATTGCATTACTCCAGATACCCATATCGATGAAGTCCTTCA 6511
Query 77107 GGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTAC 77166
| || ||||||||| || || || || || | ||| ||||| | || || ||
Sbjct 6510 ACATATAAGGATTAACAATCTGGAACTCACCGGCCAAAACTCTTCTTTGATAGATGTTGG 6451
Query 77167 TGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCA 77226
|| |||| || | | |||| |||| |||| ||| |||| ||||| ||||||||||
Sbjct 6450 ATGTGAATGGCTCGAAACATTCGTTGTAACCCATAATCTGAGATGTAGATGCAGTTGGCA 6391
Query 77227 TAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATT 77286
| ||||||| || || ||| || | || | | || || | | |||| | |
Sbjct 6390 TTGGTGCCAATAACAACGAATTCCTCAATCCTTTCTTGGCGACTTGAGCCTTTAAGTCAT 6331
Query 77287 TCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTAC 77346
||| ||||||||||| | ||| || ||| | ||| ||||| || || || |||
Sbjct 6330 CCCAGTCCCAAAGATCGGTTGGTTTCTTATTCCACATATCATATTGAAGGATACCTTTAG 6271
Query 77347 TAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCG 77406
|| ||||| | |||||| ||| | ||||| ||||||||| ||||
Sbjct 6270 ATGCTGGCGATCCTTCGTATGTTGAATAGGTACCTTCCTCGGCAGCTAGTTGACAAGATT 6211
Query 77407 CTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAA 77466
|||||||||| | | || | || || || |||| |||| | || | |||||
Sbjct 6210 CTTCCAATGCAGCATGGTATAAAGTCTCAAAGATCTGAATATTCAATTCACGAGCTTCTG 6151
Query 77467 TACTATCAAACGGATAATGTAAAA-GAATAAAGGCATCTGCTAATCCCTGAACTCCAATA 77525
||| || ||||| | | | | ||| |||| |||||| | || || | || |||
Sbjct 6150 GACTCTCGAACGGTAGACGAAGCATGAAGAAAGT-ATCTGCAAGACCTTGGATACCGATA 6092
Query 77526 CCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATG 77585
|||||||||||| |||| |||| ||| | || ||||||| ||||| || || ||
Sbjct 6091 GCAATAGGTCTATTTCTCATATTCGAATTACGGGCCTCTGGAACTGGATAGTAGTTCCTG 6032
Query 77586 TCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAA 77645
||||||| | | || | || | | ||| || ||| | | | || ||| |||
Sbjct 6031 TCTATAACTCTGTTCAAGTTACGAGTAACAACCTTAGTGATTTGATGTAATTTCTCAAAG 5972
Query 77646 TCAAATC--------TTC-CATCT-AT--AACAAACATGTTCAAAGCTATAGAT--GCTA 77691
| || | ||| ||||| || ||| || || | ||| | | || || |
Sbjct 5971 TTGAACCAAGACGATTTCTCATCTGATTCAACGAA--TGCTGGAAGACAGATATTAGCCA 5914
Query 77692 GATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTAC 77751
|||||| || | || || || | || |||| | | ||| |||| ||
Sbjct 5913 AATTACAGACACCAACTTCTTTTGGTGAGGAGTATTCAACAACCTCACAGCATAAGTTGG 5854
Query 77752 TACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAA 77811
| || ||||| || ||||| | ||| || |||||| | || || | || || || |
Sbjct 5853 ATGACTTAATAGTACCGAGATTCTTTTGATTACTCTTTCTGTTACAAGCATCTTTGTAGA 5794
Query 77812 GAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAG 77871
|| || ||||| || |||||| | || | || | ||| | ||| | | |
Sbjct 5793 TCATGAATGGAGTACCAGTTTCAGTTTGGGCCTCCAAAATCTGATACCAAAGCTTTTGTG 5734
Query 77872 CTTTTATCATAGAT-TTGTATCGCCTCTCTC--TTTCATATTGAGTATATAGCCGTTCAA 77928
| || | || | || || | | | || ||||||||| || || | ||| |
Sbjct 5733 CCTTGAC---AGTTCTTCTACCACGACCTTCCTTTTCATATTTGGTGTACAATTTTTCGA 5677
Query 77929 ATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGT 77988
| ||||| || | ||||| | ||||| |||| || | | ||| | |||
Sbjct 5676 ACTCATCACCGTAGACATCGGAAAGGCCAGGAGCTTCAGAAGGTGAGAACAAAGTCCATG 5617
Query 77989 CACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGAT 78048
||||| ||| | || || ||||| || |||||||| ||||| ||||| || | ||
Sbjct 5616 GACCATTTTCTTCCACACGCTTCATGAAAAGATCAGGAATCCAAAGAGCTGGGAACAAAT 5557
Query 78049 CTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATAT 78108
| |||| |||| ||||| || || ||| | | ||||| || || | ||||
Sbjct 5556 CACGGGCTCTAATCTCTTCCTTACCATGGTTCATCCGGATATCGATGAAATCGAAGATAT 5497
Query 78109 CAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGAT 78168
| | |||||| ||||| | ||| | || || | ||||| || || ||||| || ||||
Sbjct 5496 CTGCATGCCAAGGTTCCAAATAGACGGCAATGGCACCAGGACGCTTGTTACCACCTTGAT 5437
Query 78169 CTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTC 78228
| | ||||||||| || | || | || | | ||| ||||| ||||| ||||| || |
Sbjct 5436 CGACATATCTGGCAGTACTGTTGAAGACACGAATCATAGGAATGATACCATTAGAAGTAC 5377
Query 78229 CATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTA--- 78285
|||| || || | ||| || ||| | || ||||| ||| ||||||| | ||
Sbjct 5376 CATTGGTACCTGCAATGTATGAGCCAGTAGCACGAATGTTA----TGGATATGCATACCG 5321
Query 78286 -TTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCT 78344
| || || || | ||||| |||| |||||| | ||||| |||||||||||||| ||
Sbjct 5320 ATACCACCGGCGGTTTTAGAAATTAAAGCGCACTGCTTCAAAGTATCGTAGATACCTTCG 5261
Query 78345 ATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 78404
|| |||||| ||||| || | ||||| |||||| ||| | | ||| |||
Sbjct 5260 ATGGAGTCATCTTTCATGGCAACCAAGAAACATGAAGACATCTGAGGTCTAGGAGTACCT 5201
Query 78405 GCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTT 78464
||||| || || || || || |||||||| || | || ||| | || ||||| |
Sbjct 5200 GCATTGAACAAGGTTGGTGAAGCATGCGTGAAGTAACGTTTAGACATGAGGTTGTAAGAC 5141
Query 78465 TCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGC 78524
|||| | || || || | ||| || || || || |||||||||| | ||||
Sbjct 5140 TCAAGAACTTTAGGAATATCACTACCATGGATACCAACGGCAACACGCATCAGTAAATGC 5081
Query 78525 TGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTA 78584
|||||||| || | ||| || ||| | | ||| ||||| |||||| |||||
Sbjct 5080 TGAGGTCTCTCGGCGACTTTACCGTTGATTCTAAGCAAATATGACCGTTCCAACGTTTTG 5021
Query 78585 AAACCAAAATAGTTGTA--TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTAT 78642
||||| ||||| ||||| ||||| ||||| ||||| | || |||| || | | ||
Sbjct 5020 AAACCGAAATAATTGTAGTTGAAA--TCTCTATCGTAGTTGATGGCAGAGTTCAACTCAT 4963
Query 78643 CTTTGTATTTGGTAACAATATCCATGACAGTAGTT-GAAATAATAGGAGATCGTACACCA 78701
| || | | ||||||| ||| | || ||||| |||||| || | | |
Sbjct 4962 CCTTATGAGCCATGACAATAT-CATAGGTCTCCTTAGAAATCATAGGACAT--TTCTTCT 4906
Query 78702 T--TTTTAGGATTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttG 78759
| | |||||||| || | | | | ||| | || ||||| ||| | ||||| |
Sbjct 4905 TGGTCTTAGGATTGTAGTAATCATAAAGATCCTGGATGACATCGGAAAAGTGCTTTTTGG 4846
Query 78760 TTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTT 78819
| | |||||| | || || | || | | |||||| | ||||||| ||||||||
Sbjct 4845 TCTGCTTGTGCAAGTTCGAGATTGCCAAACGTGCAGCCAATGTAGCATAGTCAGGATGCA 4786
Query 78820 GTGTAGTACAAGT-GGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACC 78878
| ||||| || || ||||| | || || | ||| |||| ||||| | || || ||
Sbjct 4785 GAGTAGT-CATGTAAGCTGCAGTCTCGGCAGTTAAGTTATCCAACTCAACGGTGGTCACA 4727
Query 78879 CCA 78881
|||
Sbjct 4726 CCA 4724
>seq173
Length=13397
Score = 178 bits (196), Expect = 2e-39
Identities = 600/918 (65%), Gaps = 31/918 (3%)
Strand=Plus/Minus
Query 47825 ATCTTCTTGAGACATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATT 47884
|||| |||| | |||||| || || ||||| || ||| | |||||||| || ||
Sbjct 11499 ATCTCCTTG-GCCATAACACCGGCCTTCTGATAATCGGACACCCTCTTCTCGAAGAAGTT 11441
Query 47885 AGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAt 47944
|| || ||| |||| || || || ||||| |||||||||||||| || || || |
Sbjct 11440 CGTCTTTCCTGCCAACGAAATGTTCTCCATGAAATCAAATGGATTCTTGGCGTTGTAGAC 11381
Query 47945 ttttttAAATCCTAATTCTGAAATCAG---TCTATCTGCAACGAATTCTATATATCTTTT 48001
|| | | |||| | || | ||| ||| || ||| ||| || | |||
Sbjct 11380 CTTCTCACATCCGAGA---GAGACCAGCAATCTGTCGGCACAGAAGTCAACGTATTCACA 11324
Query 48002 CATCATTTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTA-AGAAACTCTT 48060
|||||| || || ||||| || | | ||| |||| || || | ||||||||||
Sbjct 11323 CATCATATCGCAGTTCATACCCAACAACGAAACAGGTAATGCGTCTCTCCAGAAACTCTT 11264
Query 48061 GTTCGATAGTGACAGCATCC---ACTATTATC--GATGTTACCGTTTCCTCACTTGGTGG 48115
| ||||| ||| || ||| | ||| || |||| | || || ||| || ||
Sbjct 11263 CT-CGATATCGACGGCCTCCGTCATGATTCTCTTGATGATG--GT---CTTACTAGGAGG 11210
Query 48116 ATACAACAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACT 48175
|| | ||| ||| || | | || || || || || ||||| ||||| || |
Sbjct 11209 ATGCTTCAAGTGTGAGAATAGGAGGCAGGCGAAGTCCGTGTGTAGACCCTCATCCCTGCA 11150
Query 48176 AATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATAT 48235
|| | ||||| || ||||| ||||| ||||| | || | || || | ||| || ||
Sbjct 11149 GATAAGCTCGTTCGAGAATGTAAGACCTGGCATCAAACCTCTCTTCTTCAACCAGAAGAT 11090
Query 48236 TGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTC 48295
| || || ||||| || ||||| | || || | ||| ||||| || | ||||||
Sbjct 11089 CGAAGCAAACGATCCGGAGAAGAACACACCCTCGATGGCTGCAAAGGCAACCAATCTCTC 11030
Query 48296 TCCGTAACTGGCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTAC 48352
|||| ||| || |||| ||||| | | |||||| ||||| | ||| |
Sbjct 11029 GGCGTACAAGGCGTCCTTGTTATTCATCCATCTGTATGCCCACAGTGCCTTTTCCTTGAT 10970
Query 48353 ACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTA 48412
| || || || || || ||||| || | ||| ||| || |||| | |||||
Sbjct 10969 AGGTGGAATGGTCTCGATGGCATTGAACAAGTAGTCCGATTCCTTCTTATCGGTGACGTA 10910
Query 48413 AGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCC 48472
|| || | || ||| ||| | |||||||||||||| |||| ||||| || ||
Sbjct 10909 GGTCTCAAGCAATAGAGAGTACGTCTCGGAGTGAATATTCTCAACCATGATCTGGAAGCC 10850
Query 48473 GTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTC--AGCCAAATTC 48530
||| || ||| || || | | ||| |||| | | || | |||| ||||| |||
Sbjct 10849 GTAGAATGCTCTTGCCTCAGGCAGCTGAACCTGC-TGCATGA-AGTTCTGGGCCAAGTTC 10792
Query 48531 TCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTA-ATAAAATATTT 48589
|||| || | |||||| || || || || || || || | | | || || ||| |
Sbjct 10791 TCATCGACCAATCCATCGGATGCTGCGAAGAAGGCCAAGAC-TCTCGATATGAAGTATCT 10733
Query 48590 TTCGTTGGAAGTCA---GTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTC 48646
||||||| ||| | || |||||||| || ||| || || | ||| | |||||
Sbjct 10732 CTCGTTGGCGTTCATTCGGTTGTTCCAGTCTGGGAGATCCTTCGAAAGATCGATCTCTTC 10673
Query 48647 AGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTATTGGAT 48706
|| |||||||| || |||||||| || || ||||| | ||| ||||| ||| || ||
Sbjct 10672 GGCCGTCCAAAAGGAGGCCTCTGCCTTCTTGTACATCTGCCAGATATCGTCGTACTGAAT 10613
Query 48707 TGGGAAAATAACAAATCT 48724
||||| || || |||||
Sbjct 10612 AGGGAACATCACGAATCT 10595
>seq96
Length=143779
Score = 145 bits (160), Expect = 1e-29
Identities = 363/543 (67%), Gaps = 10/543 (2%)
Strand=Plus/Plus
Query 77755 ATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAA 77814
||||||| || || ||||| |||||||| || ||| || | || ||||| ||||
Sbjct 92040 ATTTGATGGTTCCAAGATTCTGTTGGTTTGATTTGGCATTACAGGCATCTTTATAGAGAA 92099
Query 77815 TAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTT 77874
|| || || || ||||| ||| ||| | ||| | |||||| ||| || |
Sbjct 92100 GGAAAGGTGTACCAGTTTCTGCCTGAGATATAAGAATCTTCTCCCAGACCTTTCTTGCCT 92159
Query 77875 TTATCATAGATTTGTAT--CGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTC 77932
| ||| | ||||||| | | | ||| | ||||| ||||||| | ||| |
Sbjct 92160 TGATCT--GCTTTGTATATCTCTTTTCTGTCTCATACGTTGTATATAATGTATTAAACTT 92217
Query 77933 ATCTCCCCAAACATCATCCAATCCAGG-GCATTCATTTGGGCACATCAATGAC-CA-GTC 77989
|| |||||||||||| | ||| || ||| | | | | || | | || |||
Sbjct 92218 GTCACCCCAAACATCAGAAAGTCCTGGAGCAGTATCCTCAGAAAATAGACTCCACATGTC 92277
Query 77990 ACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATC 78049
| || ||| ||||||| ||||||||| | || || ||||||| ||| ||||||||
Sbjct 92278 ATCA-CTT--TTAACTCTTTTCATAAATAAGTCTGGAATCCATAACGCATAAAATAGATG 92334
Query 78050 TCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATC 78109
| || | |||||| || || ||||||| ||||||| | || ||||| | |||
Sbjct 92335 CCTGGCCCGCATTTCTTCCTTGCCATGATTCTTTCTAAGATCCAAGAATTCCATTACATC 92394
Query 78110 AGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATC 78169
|| ||||||||||||| |||| || | || || | |||||| || || |||||
Sbjct 92395 TGAGTGCCATGGTTCTAAATATGCACAGATTGCCCCTGGCCTTTTATTTCCCCCTTGATC 92454
Query 78170 TATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCC 78229
| |||| | ||| | |||| || | |||||||| ||| || ||||||| ||
Sbjct 92455 AACATATTGAGATACACTATCAAAAACCCTTAGCATTGGAACAATTCCACTAGATGTGCC 92514
Query 78230 ATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCC 78289
|||||| || |||||||| |||| ||| | | |||||||||| ||||| || ||
Sbjct 92515 ATTTGTACCTGAAATATAGGTTCCCGATGCTCTCACATTACTAATGTGCATCCCAATACC 92574
Query 78290 TCC 78292
||
Sbjct 92575 ACC 92577
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694667245678560
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