Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq115 300 2e-76
seq96 167 3e-36
>seq115
Length=359903
Score = 300 bits (332), Expect = 2e-76
Identities = 1198/1870 (64%), Gaps = 37/1870 (2%)
Strand=Plus/Minus
Query 75371 TCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTT 75430
|||| |||||||| |||| | | || | | |||||| | ||||||||||||||
Sbjct 6844 TCCACAGTGAACTGGATGGCACGTGCGGCAGCCTGTGTACGCAAGTAGTACATACCAGTC 6785
Query 75431 TTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGA-ATAACTCGGATC 75489
|| |||||| ||||||| ||||| |||||| || | || ||| | ||
Sbjct 6784 TTAAGACCCTTCTTCCATCCATAGAAGTGCATGGAAGTCAACTTACCCATAGTTGGGGAT 6725
Query 75490 GGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCAT 75549
|| | |||||||||||| ||||| |||| |||| | || ||||| || || |||||
Sbjct 6724 TGCAA-ATGAATATTCATGGACTGTGATTGACAGATGTATGCACCTCTGTCGGCAGCCAT 6666
Query 75550 TTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATC 75609
| || | | || || | || ||||||| || | | || |||| | ||
Sbjct 6665 ATCAATGACAGATTTCTGTGAGATCTCCCAAACGGTACGATACAATTTCTTGAATTTCTC 6606
Query 75610 TGGAAGATTTG-TA--TTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTC 75666
||| | ||||| || || || || || || ||| || || | ||| || |
Sbjct 6605 TGGCACATTTGGTAAGTTCTGGATAGAACCATTATCCTTAATGATAAAGTCCTTCATTGC 6546
Query 75667 ATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAA 75726
|| | |||| | | ||| | || | | | | || |||||||||||| || ||
Sbjct 6545 ATTACTCCAGATACCCATATCGATGAAGTCCTTCAACATATAAGGATTAACAATCTGGAA 6486
Query 75727 TTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATT 75786
|| || | ||| ||||||| || || || || |||| || | | |||| ||
Sbjct 6485 CTCACCGGCCAAAACTCTTCTTTGATAGATGTTGGATGTGAATGGCTCGAAACATTCGTT 6426
Query 75787 GTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCT 75846
|| |||| ||| |||| || || ||||| ||||| ||||||| || || ||| ||
Sbjct 6425 GTAACCCATAATCTGAGATGTAGATGCAGTTGGCATTGGTGCCAATAACAACGAATTCCT 6366
Query 75847 GAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTAC 75906
| || | | || || | | |||| | | ||| ||||||||||| | ||||
Sbjct 6365 CAATCCTTTCTTGGCGACTTGAGCCTTTAAGTCATCCCAGTCCCAAAGATCGGTTGGTTT 6306
Query 75907 AACATCCCAGAGATCGTATTGTAGAATTCCGTT----GCTAGCATATGATCCATTATATG 75962
|| ||| | ||| ||||| || || || || ||| || ||||| | ||||
Sbjct 6305 CTTATTCCACATATCATATTGAAGGATACCTTTAGATGCTGGC----GATCCTTCGTATG 6250
Query 75963 TTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAA 76022
|| || || || |||| ||||||||| ||| | || || ||| | | || |
Sbjct 6249 TTGAATAGGTACCTTCCTCGGCAGCTAGTTGACAAGATTCTTCCAATGCAGCATGGTATA 6190
Query 76023 TTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTA 76082
|| || || |||| |||| | || | ||||| |||| || || || | | |
Sbjct 6189 AAGTCTCAAAGATCTGAATATTCAATTCACGAGCTTCTGGACTCTCGAACGGTAGACGAA 6130
Query 76083 AAA-GAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTA 76141
| ||| ||| | |||||| || || || | || ||| |||||||||||| |||| ||
Sbjct 6129 GCATGAAGAAA-GTATCTGCAAGACCTTGGATACCGATAGCAATAGGTCTATTTCTCATA 6071
Query 76142 TTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTT 76201
|| ||| | || ||||||| || || || || | ||||||| | | || | ||
Sbjct 6070 TTCGAATTACGGGCCTCTGGAACTGGATAGTAGTTCCTGTCTATAACTCTGTTCAAGTTA 6011
Query 76202 CTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAAT-----CAA----ATTTTCCA 76252
| ||| || ||| | | | || ||| ||| | ||| |||| ||
Sbjct 6010 CGAGTAACAACCTTAGTGATTTGATGTAATTTCTCAAAGTTGAACCAAGACGATTTCTCA 5951
Query 76253 TCTATCACAAACA-TATT--AAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTA 76309
||| ||| | | | |||| ||| || | |||||| || | || || ||
Sbjct 5950 TCTGATTCAACGAATGCTGGAAGACAGATATTAGCCAAATTACAGACACCAACTTCTTTT 5891
Query 76310 GCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTT 76369
| || |||| | | ||| ||||| || |||| ||||| || |||||
Sbjct 5890 GGTGAGGAGTATTCAACAACCTCACAGCATAAGTTGGATGACTTAATAGTACCGAGATTC 5831
Query 76370 TGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCA 76429
| ||| || |||||| ||||||| | || || || | | || ||||| |||||||||
Sbjct 5830 TTTTGATTACTCTTTCTGTTACAAGCATCTTTGTAGATCATGAATGGAGTACCAGTTTCA 5771
Query 76430 ATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGAT-TTGTATCG 76488
| || | || | ||| | ||| | | || || | || | || || |
Sbjct 5770 GTTTGGGCCTCCAAAATCTGATACCAAAGCTTTTGTGCCTTGAC---AGTTCTTCTACCA 5714
Query 76489 CTTCTCTC--TTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCC 76546
| | || ||||||||| || || || ||| || ||||| || | |||||
Sbjct 5713 CGACCTTCCTTTTCATATTTGGTGTACAATTTTTCGAACTCATCACCGTAGACATCGGAA 5654
Query 76547 AAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTC 76606
| |||||| |||| || | | ||| | ||| ||||| ||| | || || |||
Sbjct 5653 AGGCCAGGAGCTTCAGAAGGTGAGAACAAAGTCCATGGACCATTTTCTTCCACACGCTTC 5594
Query 76607 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTT 76666
|| || |||||||| ||||| ||||| || | ||| |||| |||| ||||| ||
Sbjct 5593 ATGAAAAGATCAGGAATCCAAAGAGCTGGGAACAAATCACGGGCTCTAATCTCTTCCTTA 5534
Query 76667 CCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 76726
|| ||| | | ||| | ||| || | ||||| | |||||| ||||| | |||
Sbjct 5533 CCATGGTTCATCCGGATATCGATGAAATCGAAGATATCTGCATGCCAAGGTTCCAAATAG 5474
Query 76727 ATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTA 76786
| || || |||| || || || ||||| || ||||| | |||||||||||| | ||
Sbjct 5473 ACGGCAATGGCACCAGGACGCTTGTTACCACCTTGATCGACATATCTGGCAGTACTGTTG 5414
Query 76787 TAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTT 76846
| || | | ||| ||||| || || ||||| |||||||| || || | ||| ||
Sbjct 5413 AAGACACGAATCATAGGAATGATACCATTAGAAGTACCATTGGTACCTGCAATGTATGAG 5354
Query 76847 CCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGA 76906
||| |||||||| ||| ||| | || || || || || ||||||| |||| |
Sbjct 5353 CCAGTAGCACGAATGTTATGGATATGCATACCGATACCACCGGCGGTTTTAGAAATTAAA 5294
Query 76907 GCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGA 76966
|| || | ||||| || || ||||| || || || ||||| ||||| || |
Sbjct 5293 GCGCACTGCTTCAAAGTATCGTAGATACCTTCGATGGAGTCATCTTTCATGGCAACCAAG 5234
Query 76967 AAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGA 77026
||||| |||||| ||| | | ||| |||||||| ||||| || || || |||||
Sbjct 5233 AAACATGAAGACATCTGAGGTCTAGGAGTACCTGCATTGAACAAGGTTGGTGAAGCATGC 5174
Query 77027 GTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGA 77086
||||| | || ||| | || ||||| | |||| |||| ||||| | |
Sbjct 5173 GTGAAGTAACGTTTAGACATGAGGTTGTAAGACTCAAGAACTTTAGGAATATCACTACCA 5114
Query 77087 TGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTT 77146
|| || || || || |||||||||| | ||||||||||| || | ||| ||
Sbjct 5113 TGGATACCAACGGCAACACGCATCAGTAAATGCTGAGGTCTCTCGGCGACTTTACCGTTG 5054
Query 77147 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGT 77204
||| | | ||| ||||| |||||| ||||| ||||| ||||| ||||| ||||| |
Sbjct 5053 ATTCTAAGCAAATATGACCGTTCCAACGTTTTGAAACCGAAATAATTGTAGTTGAAA--T 4996
Query 77205 CTCTTTCGTA 77214
|||| |||||
Sbjct 4995 CTCTATCGTA 4986
>seq96
Length=143779
Score = 167 bits (184), Expect = 3e-36
Identities = 573/879 (65%), Gaps = 41/879 (5%)
Strand=Plus/Plus
Query 76019 TAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAA 76078
|| ||||||| ||||||| |||||||||| | | | ||| | ||| ||| || |
Sbjct 91694 TATATTGTTTGGAAAATCATCTTATTAAGCTTTGTGGATTCTTTAG-ATCCAAATGACAT 91752
Query 76079 TGTAAAAG-AATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCT 76137
| | | || |||| |||| || | ||| || ||||||| | | || || | ||| |
Sbjct 91753 CCTCATACTAAAAAATACATCGGCCAATCCTTGTACTCCAACAGCTATTGGACGATGCTT 91812
Query 76138 CTTATTGGAAATTTCAGC-TTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGA 76196
| ||| || || | || ||| | ||||| || || || || | | |||| |
Sbjct 91813 CAAATTCGATCTT-CGGCATTCCTCCAGTGGGTACGAACCAACGTCAATGACTCTATTAA 91871
Query 76197 GATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAAT--TTTCCATC 76254
||||| |||| |||||| ||| || | ||||| | |||| ||| ||||| ||
Sbjct 91872 GATTTTGAACAAGGACTTTAGTCACATCATGAAGTTTCTGGAAATTAAAGGATTTCCTTC 91931
Query 76255 TAT-------------CACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTA 76301
| ||| |||| ||| | | || ||| |||||||||||| |
Sbjct 91932 CCTGAGAGTTGGTTTCCACGTACATTGGGAGACCAACTGAACCTAAATTACAAACGGCAA 91991
Query 76302 CCTCATTAGCATTGGCA---TATTGTATTATCTCCGTGCATAGATTACTACACTTGATAG 76358
| || | | |||| | |||| | | ||| || ||||| | ||||| |
Sbjct 91992 CTTCGT---CCTTGGAAGAGTATTCAACAACCTCACAACAAAGATTGGATGATTTGATGG 92048
Query 76359 TTCCAAGATTTTGTTGGTTGCTCTTTTTG--TTACATGAGTCCTTATAAAGAACAAACGG 76416
|||||||||| |||||||| | ||| | ||||| | || ||||| |||| || ||
Sbjct 92049 TTCCAAGATTCTGTTGGTT--TGATTTGGCATTACAGGCATCTTTATAGAGAAGGAAAGG 92106
Query 76417 AGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTAT 76476
|| |||||||| ||| ||| | ||| | |||||| ||| || || ||
Sbjct 92107 TGTACCAGTTTCTGCCTGAGATATAAGAATCTTCTCCCAGACCTTTCTTGCCTTGATCT- 92165
Query 76477 AGATTTGTAT--CGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCC 76534
| ||||||| | ||| ||| | ||||| ||||||||| | ||| | || |||
Sbjct 92166 -GCTTTGTATATCTCTTTTCTGTCTCATACGTTGTATATAATGTATTAAACTTGTCACCC 92224
Query 76535 CAAACATCATCCAAACCAGGA-CATTCATTCGGACACATCAATGACCAC---TCACCATC 76590
||||||||| | || ||| || | || | | | | | |||| ||| || |
Sbjct 92225 CAAACATCAGAAAGTCCTGGAGCAGT-ATCCTCAGAAAATAGACTCCACATGTCATCA-C 92282
Query 76591 TTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGT 76650
|| ||||| | ||||||||| | || || ||||||| ||| |||||||| | ||
Sbjct 92283 TT--TTAACTCTTTTCATAAATAAGTCTGGAATCCATAACGCATAAAATAGATGCCTGGC 92340
Query 76651 TCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATG 76710
| |||||| || || ||||||| ||||||| | ||| ||||| | ||| || ||
Sbjct 92341 CCGCATTTCTTCCTTGCCATGATTCTTTCTAAGATCCAAGAATTCCATTACATCTGAGTG 92400
Query 76711 CCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATA 76770
||||||||||| |||| || | || || | |||||| || || ||||| | |||
Sbjct 92401 CCATGGTTCTAAATATGCACAGATTGCCCCTGGCCTTTTATTTCCCCCTTGATCAACATA 92460
Query 76771 TCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGT 76830
| | ||| | |||| || | |||||||| ||| || ||||||| ||||||||
Sbjct 92461 TTGAGATACACTATCAAAAACCCTTAGCATTGGAACAATTCCACTAGATGTGCCATTTGT 92520
Query 76831 TCCAGAAATATAACTTCCACATGCACGAATATTACTAAT 76869
|| |||||||| |||| |||| | | |||||||||
Sbjct 92521 ACCTGAAATATAGGTTCCCGATGCTCTCACATTACTAAT 92559
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712932804809280
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