Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq1 127 5e-24
seq110 107 4e-18
>seq1
Length=504328
Score = 127 bits (140), Expect = 5e-24
Identities = 156/212 (74%), Gaps = 1/212 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| |||||||| ||||| ||||||||||||||||| | | |||||| || ||||| |
Sbjct 435094 CAAG-TGAAGAGTGGACTCCTTTTGGATGTTGTAATCAGAAAGAGTTCTACCGTCTTCCA 435152
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| || ||||| || | ||||| || || | | |||||| ||||| || ||||
Sbjct 435153 ACTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGTGGGATTCCCTCCTTATCCTGAA 435212
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || || |||||| | || | | |||| ||| ||| ||||| | ||||| || || |
Sbjct 435213 TCTTCTGCTTGACATTGTCAATGGTGTCAGAAGACTCGACTTCCAAGGTAATGGTCTTAC 435272
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTTA 152108
|||| | ||||| ||||| | |||||| ||
Sbjct 435273 CCGTCAAGGTCTTAACGAAAATTTGCATTCTA 435304
>seq110
Length=92542
Score = 107 bits (118), Expect = 4e-18
Identities = 151/211 (72%), Gaps = 1/211 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||| ||||| || || || || |||||||| | | |||||| |||||||| |
Sbjct 52922 CAAG-TGAAGGGTAGATTCCTTCTGAATATTGTAATCAGAAAGAGTTCTGCCATCTTCCA 52980
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
||| || || ||||| | ||||| || || | | ||||||||||| || || |
Sbjct 52981 ACTGTTTACCAGCAAAGATCAATCTCTGTTGATCAGGTGGAATTCCTTCCTTATCCTGGA 53040
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| ||||| |||||| | || | |||| ||| ||| || || | || ||||| || |
Sbjct 53041 TCTTTTGCTTGACATTGTCGATCGTGTCCGAAGACTCGACCTCCAAGGTGATAGTCTTAC 53100
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
| || || ||||| ||||| | ||||| ||
Sbjct 53101 CTGTAAGGGTCTTAACGAAAATTTGCATCTT 53131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153818153784109
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |