Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq110 138 2e-27
seq1 129 1e-24
seq109 114 3e-20
>seq110
Length=92542
Score = 138 bits (152), Expect = 2e-27
Identities = 150/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| || || || ||||| |||| ||| || | |||||| || | ||||| || |||||
Sbjct 52937 TTCCTTCTGAATATTGTAATCAGAAAGAGTTCTGCCATCTTCCAACTGTTTACCAGCAAA 52996
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | ||||| ||| ||||| || ||||| || ||||||||| || || |
Sbjct 52997 GATCAATCTCTGTTGATCAGGTGGAATTCCTTCCTTATCCTGGATCTTTTGCTTGACATT 53056
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
||||| |||||||||| ||||| || | ||||| |||||||| || | ||||||||
Sbjct 53057 GTCGATCGTGTCCGAAGACTCGACCTCCAAGGTGATAGTCTTACCTGTAAGGGTCTTAAC 53116
Query 283088 GAATATCTGCATTTTCATA 283106
||| || ||||| || |||
Sbjct 53117 GAAAATTTGCATCTTGATA 53135
>seq1
Length=504328
Score = 129 bits (142), Expect = 1e-24
Identities = 168/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| | || | ||| |||| || | ||| || |||||||||||||| ||||
Sbjct 435073 ACCACCTCTCAATCTAAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAATCAGA 435132
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || | || || || | || || || || || ||||| | ||||| ||| ||
Sbjct 435133 AAGAGTTCTACCGTCTTCCAACTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGTGG 435192
Query 282992 AATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
|| |||||||| || || ||||| ||| || || | || || ||||| |||| ||||
Sbjct 435193 GATTCCCTCCTTATCCTGAATCTTCTGC-TTGACATTGTCAATGGTGTCAGAAGACTCGA 435251
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100
|||| | || || |||||||||||||| ||||||||||| || ||||||
Sbjct 435252 CTTCCAAGGTAATGGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATT 435301
>seq109
Length=92601
Score = 114 bits (126), Expect = 3e-20
Identities = 129/173 (75%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 317029 GGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCA 317088
||||| ||||||| || || || | || ||| ||| || || ||||| |||||||||
Sbjct 53802 GGGAAACCTTCCACTTGGCCATTTGCCATTGCCTTCAAAAGAGTGGACTTACCAGCACCA 53861
Query 317089 TTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGA 317148
|| || |||||||||||||| | || || ||||| | || | || || |||| |
Sbjct 53862 TTAGGACCGCAAAGACCATATCTCTTACCACGCTTCAAACGAAGTTGAGTCTTATTCAAA 53921
Query 317149 AGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201
|||||||| ||||||| |||| |||||| ||||| | ||||| ||||| ||
Sbjct 53922 AGAATCTTGGCACCATAAGCCAAAGAGAATTCACAGTTACACAAATCCTCACC 53974
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046736799369066
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |