Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq1 145 5e-30
seq110 129 4e-25
>seq1
Length=504328
Score = 145 bits (160), Expect = 5e-30
Identities = 175/234 (75%), Gaps = 8/234 (3%)
Strand=Plus/Plus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || ||||||| ||| | |||| |||||| ||| |||||||||||||||||||||
Sbjct 435071 ATACCACCTCTCAATCTAAGAACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAATCA 435130
Query 44168 G--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225
| ||||| | |||| |||| |||||| || || || ||||| | ||| ||||| |
Sbjct 435131 GAAAGAGTT--CTACCGTCTTCCAACTGCTTACCAGCGAAAATCAATCTCTGTTGATCAG 435188
Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGA 44283
|| | || ||||| ||| ||||||||||| || ||| | |||||||| | ||
Sbjct 435189 GTGGGATTCCCTCCTTATCCTGAATCTTCTGCTTGACATTGT--CAATGGTGTCAGAAGA 435246
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || |||| ||||| ||||| ||||| | |||||| ||||| ||||||||
Sbjct 435247 CTCGACTTCCAAGGTAATGGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCAT 435300
>seq110
Length=92542
Score = 129 bits (142), Expect = 4e-25
Identities = 174/237 (73%), Gaps = 8/237 (3%)
Strand=Plus/Plus
Query 44105 TTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAA 44164
||| | || ||||||| |||||| |||| |||||| || ||||| || || ||||||
Sbjct 52896 TTCTTACCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTCTGAATATTGTAA 52955
Query 44165 TCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222
|| | ||||| || | || |||| ||| || || ||||||||||| | ||| ||||
Sbjct 52956 TCAGAAAGAGTTCT-GC-CATCTTCCAACTGTTTACCAGCAAAGATCAATCTCTGTTGAT 53013
Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGC 44280
| | || | |||||||| ||| ||||| ||||| || ||| | || ||||| |
Sbjct 53014 CAGGTGGAATTCCTTCCTTATCCTGGATCTTTTGCTTGACATTGT--CGATCGTGTCCGA 53071
Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || ||||||| || || ||||| || || |||||||| ||||| ||||||||
Sbjct 53072 AGACTCGACCTCCAAGGTGATAGTCTTACCTGTAAGGGTCTTAACGAAAATTTGCAT 53128
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359989614658443
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |