Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq110 147 5e-30
seq1 125 2e-23
>seq110
Length=92542
Score = 147 bits (162), Expect = 5e-30
Identities = 164/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || || ||||| || || |||||| | ||||| || || |||
Sbjct 53125 CAAATTTTCGTTAAGACCCTTACAGGTAAGACTATCACCTTGGAGGTCGAGTCTTCGGAC 53066
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || ||||| |||||||| ||||| || |||||||| || || || || ||
Sbjct 53065 ACGATCGACAATGTCAAGCAAAAGATCCAGGATAAGGAAGGAATTCCACCTGATCAACAG 53006
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || || |||||| | |||||||| || |||||| | ||||| || |
Sbjct 53005 AGATTGATCTTTGCTGGTAAACAGTTGGAAGATGGCAGAACTCTTTCTGATTACAATATT 52946
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| || ||||| || || || | || |||||| | |||
Sbjct 52945 CAGAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGA 52907
>seq1
Length=504328
Score = 125 bits (138), Expect = 2e-23
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || | || || || || || ||| | || || || || |||
Sbjct 435297 CAAATTTTCGTTAAGACCTTGACGGGTAAGACCATTACCTTGGAAGTCGAGTCTTCTGAC 435238
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || ||||| || ||||||||||| || || |||||||| || || || ||
Sbjct 435237 ACCATTGACAATGTCAAGCAGAAGATTCAGGATAAGGAGGGAATCCCACCTGATCAACAG 435178
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || ||||| || || ||| | ||||| || || |||||| | ||||| ||| ||
Sbjct 435177 AGATTGATTTTCGCTGGTAAGCAGTTGGAAGACGGTAGAACTCTTTCTGATTACAACATC 435118
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| || || || || || | ||| | ||| | |||
Sbjct 435117 CAAAAGGAGTCCACTCTTCACTTGGTTCTTAGATTGAGA 435079
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203728439317726
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |