Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016- 09-25] 179 sequences; 10,219,415 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq110 82.4 7e-11 >seq110 Length=92542 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/196 (70%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 ||||||||||| || || || || || || | | || || | ||| || || || || Sbjct 52938 TCCTTCTGAATATTGTAATCAGAAAGAGTTCTGCCATCTTCCAACTGTTTACCAGCAAAG 52997 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACG 41789 |||| | |||||| || | |||| | ||||| ||| ||| |||||||| || | Sbjct 52998 ATCAATCTCTGTTGATCAGGTGGAATTCCTTCCTTATCCTGGATCTTTTGCTTGACATTG 53057 Query 41790 ACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 || | ||||| ||||| ||||||| || || || ||||| || || ||||| | Sbjct 53058 TCG--ATCGTGTCCGAAGACTCGACCTCCAAGGTGATAGTCTTACCTGTAAGGGTCTTAA 53115 Query 41850 CGAAAATCTGCATGTT 41865 ||||||| ||||| || Sbjct 53116 CGAAAATTTGCATCTT 53131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462302965594800