Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20custersianus_20[genbank_20GCA_5F001746385.1_202016-
09-25] 179 sequences; 10,219,415 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq110 82.4 7e-11
>seq110
Length=92542
Score = 82.4 bits (90), Expect = 7e-11
Identities = 137/196 (70%), Gaps = 4/196 (2%)
Strand=Plus/Plus
Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731
||||||||||| || || || || || || | | || || | ||| || || || ||
Sbjct 52938 TCCTTCTGAATATTGTAATCAGAAAGAGTTCTGCCATCTTCCAACTGTTTACCAGCAAAG 52997
Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACG 41789
|||| | |||||| || | |||| | ||||| ||| ||| |||||||| || |
Sbjct 52998 ATCAATCTCTGTTGATCAGGTGGAATTCCTTCCTTATCCTGGATCTTTTGCTTGACATTG 53057
Query 41790 ACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849
|| | ||||| ||||| ||||||| || || || ||||| || || ||||| |
Sbjct 53058 TCG--ATCGTGTCCGAAGACTCGACCTCCAAGGTGATAGTCTTACCTGTAAGGGTCTTAA 53115
Query 41850 CGAAAATCTGCATGTT 41865
||||||| ||||| ||
Sbjct 53116 CGAAAATTTGCATCTT 53131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462302965594800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |