Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq23 132 5e-26 >seq23 Length=838141 Score = 132 bits (146), Expect = 5e-26 Identities = 567/887 (64%), Gaps = 17/887 (2%) Strand=Plus/Minus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 ||||||||| ||| | |||||||| ||||| || || || | | || || || ||| Sbjct 743032 TGGTAATCGGAAACCCTCTTTTCGAAGAAGTTCGTCTTTCCAGCCAATGAGATGTTTTCC 742973 Query 16736 ATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAA- 16794 |||||||| || ||||| ||||| | | ||| | | || || || || ||| Sbjct 742972 ATGAAATCGAATGGATTTGTAGCGTTGTAGACTTTGTCGCAGCCTAG---GGAGAGTAAC 742916 Query 16795 --TCTATCCGCTACA-AATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAG 16851 ||| || || ||| || || | |||||| |||| | || || ||||| || | || Sbjct 742915 AATCTGTCGGC-ACAGAAGTCAACATATTGATACATCATATCACAATTCATACCCAAGAG 742857 Query 16852 ACGTACCGGAAGAGCTTCCGTCAAAAA--TCGTTGCTCTATAACAACCGCTTCCTTAATA 16909 | || || | || || || | || || || || ||| | || ||||| | || Sbjct 742856 AGAAACAGGTAATGCATCTCTCCAGAAAGTCTTT--TCAATATCCACAGCTTCAGTCATG 742799 Query 16910 ATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCG 16969 || | | | || || || | ||||| | ||| || | || || ||| Sbjct 742798 ATCTTGGTGATGATTTTCTTATTAGGAGGGTGTTTCAAATGAGAGAATAATAGGCAGGCG 742739 Query 16970 AAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGC 17029 |||||| |||||| || |||||||||| |||||||||||| || || || | || ||| Sbjct 742738 AAATCGGTATGTAAACCTTCGTCTCTGCAGATAAGTTCGTTCGAGAAGGTAAGACCTGGC 742679 Query 17030 ATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCC 17089 ||| |||| ||||||| |||||| || || || || || || || ||||| | ||| Sbjct 742678 ATCAAACCTCTCTTCTTTAGCCAAAAGATGGCCGCAAATGAACCGGAGAAGAAGACACCT 742619 Query 17090 TCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCAT 17149 |||| | || || |||| |||| ||| ||||| || || ||| | ||||| Sbjct 742618 TCGATAGCGGCGAAGGCGACCAATCTTTCTGCGTATAGTGCATCCTTGCTGTTGATCCAA 742559 Query 17150 TTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAAT 17209 | |||| || |||| ||| || || ||||| ||||| |||||||| Sbjct 742558 CGAAGAGCCCATAATGCCTTTTCCTTAATTGGGGGAATAGTTTCAATGGCATTAAATAAG 742499 Query 17210 TTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAG 17269 | || ||||| || | | || || || | | || || | || || Sbjct 742498 TAATCAGATTCCTTCTTATCTGTCACGTAGGTTTCAAGCAAGAGAGAATAGGTCTCAGAA 742439 Query 17270 TGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAAC- 17328 || |||||||||| ||||| |||||||| ||| | || || | | ||||| Sbjct 742438 TGGATGTTCTCCACCATGATCTGGAATCCGTAGAAGGCCCTAGCCTCTGGCAGCTGAACG 742379 Query 17329 TTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAA 17388 ||| || ||| || | ||| || | ||||| || || ||||| || || Sbjct 742378 TTCTGTGT-GAAGTTTTGAATCAAATTCTCATCAACGATACCATCAGAGGCGGCAAAGAA 742320 Query 17389 CGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACG---CGCCAGTCCTT 17445 ||||| | | | ||||||||| |||| | | |||| | |||||| Sbjct 742319 GGCCAACACACGTGCGATGAAATATCTTTCATTGGCATTAAGCTTGTTCTTCCAGTCAGG 742260 Query 17446 TAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATA 17505 | ||| || || | ||| | ||||| | ||||| ||| || | ||||| || || Sbjct 742259 AACATCCTTTGAGAGATCGATCTCTTCCGCAGTCCAGAAAGATGCTTCAGCCTTCTTGTA 742200 Query 17506 CATATTCCAAATATCATTGTATTGTATGGGGAATACAACATATCTAT 17552 ||| | ||||||||||| |||||| || ||||| | ||| |||||| Sbjct 742199 CATCTGCCAAATATCATCGTATTGGATAGGGAACATGACAAATCTAT 742153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545108331680