Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq15 89.7 6e-13
seq45 82.4 9e-11
>seq15
Length=115448
Score = 89.7 bits (98), Expect = 6e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| || || || | ||| ||||| || | || |||||| || |||||||| ||||
Sbjct 471 CCACCCCTCAACCTCAAGACCAAGTGAAGAGTAGACTCCTTCTGGATATTGTAGTCAGAA 412
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
|| || | | || |||| ||||||||| || || || | || |||||| || | ||
Sbjct 411 AGTGTTCTACCATCTTCTAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGAGGA 352
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136
| | || || || ||| |||||||| | | | | |||||| ||||| ||
Sbjct 351 ATACCTTCTTTATCTTGGATCTTTTGTTTCACGTTATCGATCGTGTCTGAAGATTCGACT 292
Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | |||||||||||||| |||| ||||| || || || |||||
Sbjct 291 TCCAAGGTGATGGTTTTGCCTGTTAATGTCTTGACGAAAATCTGCAT 245
>seq45
Length=579175
Score = 82.4 bits (90), Expect = 9e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| ||||| || | | ||||| |||||||| ||||||||||| ||||| || | |
Sbjct 354883 CCACCTCTCAATCTGAGAACCAAGTGCAATGTTGATTCCTTTTGAATGTTGTAGTCGGAC 354942
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
| ||| | |||| || | ||||||||||| || || | || |||||| || | ||
Sbjct 354943 AAAGTTCTGCCGTCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGTGGG 355002
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136
| | |||||| || || || || |||| | | | || || || || ||
Sbjct 355003 ATTCCCTCCTTATCTTGAATCTTCTGCTTGACATTGTCAATGGTATCAGAAGACTCGACT 355062
Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186
|| | || ||||| || ||||| | ||||| || || |||||||||||
Sbjct 355063 TCCAAGGTAATGGTCTTACCCGTCAAGGTCTTAACGAAAATTTGCATTTT 355112
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571817056773280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |