Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq23 194 2e-44
>seq23
Length=838141
Score = 194 bits (214), Expect = 2e-44
Identities = 562/859 (65%), Gaps = 7/859 (1%)
Strand=Plus/Minus
Query 15958 AACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCCATAAAATCAAA 16017
||| |||||||| ||||| || || ||||| | ||||| || |||||||| ||||| ||
Sbjct 743021 AACCCTCTTTTCGAAGAAGTTCGTCTTTCCAGCCAATGAGATGTTTTCCATGAAATCGAA 742962
Query 16018 AGGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAATAATCTATCCGCCAC 16077
|||||| | | ||| ||| ||||| || | | || ||||| || || ||
Sbjct 742961 TGGATTTGTAGCGTTGTAGACTTTGTCGCAGCCTAGGGAGAGTAACAATCTGTCGGC-AC 742903
Query 16078 A-AATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTAACAGGGATTG 16136
| || || | ||| || | ||| | |||||| ||||| || | | |||||| | ||
Sbjct 742902 AGAAGTCAACATATTGATACATCATATCACAATTCATACCCAAGAGAGAAACAGGTAATG 742843
Query 16137 CTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATATCTCTTACTACAC 16196
| ||| | | ||| | ||||| |||| || |||||| | || || | | | |
Sbjct 742842 CATCTCTCCAGAAAGTCTTTTCAATATCCACAGCTTCAGTCATGATCTTGGTGATGATTT 742783
Query 16197 TATTTAACGGAGGGTTTAATAAGTGTTTAAACATTATACAAGCAAAATCACAATGCAATC 16256
| || ||||||| | || || || | || || || ||||| ||| || |
Sbjct 742782 TCTTATTAGGAGGGTGTTTCAAATGAGAGAATAATAGGCAGGCGAAATCGGTATGTAAAC 742723
Query 16257 CTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTT 16316
||||||| || | || | ||||| || || |||||||||||||| | |||| || |
Sbjct 742722 CTTCGTCTCTGCAGATAAGTTCGTTCGAGAAGGTAAGACCTGGCATCAAACCTCTCTTCT 742663
Query 16317 TAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATG 16376
| | |||||| || || ||||||||||| || ||||| | |||||| | ||||| || |
Sbjct 742662 TTAGCCAAAAGATGGCCGCAAATGAACCGGAGAAGAAGACACCTTCGATAGCGGCGAAGG 742603
Query 16377 CAACCAATCGCTCACCGTACGTTCTAtttttactttctatccattttttagcccaatttg 16436
| ||||||| || |||| | || || || | ||||| |||||| ||
Sbjct 742602 CGACCAATCTTTCTGCGTATAGTGCATCCTTGCTGTTGATCCAACGAAGAGCCCATAATG 742543
Query 16437 ctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAAATAAtttttttCTTTGC 16496
| |||| |||| | || | || || ||||||||||| |||| ||| ||
Sbjct 742542 CCTTTTCCTTAATTGGGGGAATAGTTTCAATGGCATTAAATAAGTAATCAGATTCCTTCT 742483
Query 16497 TATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTG 16556
||||| | || || || | | | | ||| | || ||||| || |||||||
Sbjct 742482 TATCTGTCACGTAGGTTTCAAGCAAGAGAGAATAGGTCTCAGAATGGATGTTCTCCACCA 742423
Query 16557 CTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTAC-TTCAGAGTAAAACCTT 16615
||||| || || || ||| ||||| || | | || || ||| | || || ||
Sbjct 742422 TGATCTGGAATCCGTAGAAGGCCCTAGCCTCTGGCAGCTGAACGTTCTGTGT-GAAGTTT 742364
Query 16616 TCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTA 16675
| || || || | ||| || ||||| || ||||| || || | | ||
Sbjct 742363 TGAATCAAATTCTCATCAACGATACCATCAGAGGCGGCAAAGAAGGCCAACACACGTGCG 742304
Query 16676 ATAAAAtttttttCGTTATCTGAAAG---TTTTAACCAGTCAGAAAAATCTTTTGATAAA 16732
|| |||| | |||| || | ||| || |||||||| || ||| ||||| | |
Sbjct 742303 ATGAAATATCTTTCATTGGCATTAAGCTTGTTCTTCCAGTCAGGAACATCCTTTGAGAGA 742244
Query 16733 TCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATACATTTTCCATATGTCT 16792
|||| |||||| ||||||| ||||| || ||||||| || ||||| | ||| || ||
Sbjct 742243 TCGATCTCTTCCGCAGTCCAGAAAGATGCTTCAGCCTTCTTGTACATCTGCCAAATATCA 742184
Query 16793 TCGTAAACAATAGGAAACA 16811
||||| ||||| ||||
Sbjct 742183 TCGTATTGGATAGGGAACA 742165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462511560613600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |